Co-expression analysis

Gene ID	ZmAffx.771.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g67920: unknown protein (HF=8e-1)
Module size	7 genes
NF	0.60
%ile	80.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	1.00	ZmAffx.771.1.A1_at	AI746147	-	-	8e-1	At1g67920	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	1.00	Zm.12775.1.A1_x_at	CA398576	-	-	6e+0	At5g15910	dehydrogenase-related	O.I.	H.G.	S.X.	Please select
0.61	79.5	1.00	Zm.10216.1.A1_at	CD440291	hypothetical protein LOC100276703	-	7e-9	At3g05570	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	1.00	ZmAffx.1092.1.S1_s_at	AW066155	-	-	1e-107	Atcg00490	-	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	Zm.3092.1.S1_at	AW076382	-	-	5e+0	At5g13070	MSF1-like family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	ZmAffx.86.1.S1_at	AI665323	-	-	5e-5	At5g25265	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	ZmAffx.1038.1.S1_at	AI881773	hypothetical protein LOC100273522	-	3e+0	At5g57290	60S acidic ribosomal protein P3 (RPP3B)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.0	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.7	98.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.7	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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