Co-expression analysis

Gene ID ZmAffx.766.1.S1_at
Gene name Hypothetical protein LOC100191384
Homology with ArabidopsisSimilar to At3g12320: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.73
%ile 94.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.97ZmAffx.766.1.S1_atAI746089Hypothetical protein LOC100191384-3e+0At3g12320unknown proteinO.I.H.G.S.X.
0.7792.10.96ZmAffx.1356.1.S1_at40794996-158--3e+0At5g5795026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.7188.20.97ZmAffx.1486.1.S1_at11990232-43--3e-56Atcg00650-O.I.H.G.S.X.
0.6785.80.97ZmAffx.1357.1.S1_at40794996-46--2e-1At1g26921unknown proteinO.I.H.G.S.X.
0.6381.10.96ZmAffx.1511.1.S1_at11990232-52--4e-48Atcg00740-O.I.H.G.S.X.
0.5369.10.96ZmAffx.1143.1.S1_atAW399931--8e+0At5g01340mitochondrial substrate carrier family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.998.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.698.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
1.989.6GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1611525_at, orthologous to the query gene, ZmAffx.766.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6081.91611525_atAt3g12320UPF0497 membrane protein 6-1e+0At3g48890ATMP2O.I.H.G.S.X.
0.8293.91607851_atAt3g12320hypothetical protein LOC100266538-9e-2At1g04660glycine-rich proteinO.I.H.G.S.X.
0.8093.61613074_atAt3g12320similar to PDF-1e-1At2g42840PDF1 (PROTODERMAL FACTOR 1)O.I.H.G.S.X.
0.7992.71617280_s_atAt3g12320hypothetical protein LOC100258720-5e-3At2g27385unknown proteinO.I.H.G.S.X.
0.7792.31609418_s_atAt3g12320hypothetical protein LOC100246054 /// hypothetical protein LOC100255543 /// hypothetical protein LOC100258516 /// hypothetical protein LOC100261331 /// hypothetical protein LOC100266538-4e+0At5g35375unknown proteinO.I.H.G.S.X.
0.7591.31611748_s_atAt3g12320similar to PDF-1e-1At2g42840PDF1 (PROTODERMAL FACTOR 1)O.I.H.G.S.X.
0.7491.01613573_atAt3g12320hypothetical protein LOC100260045-6e-33At1g53860remorin family proteinO.I.H.G.S.X.
0.7088.61615603_atAt3g12320--2e-1At5g11770NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrialO.I.H.G.S.X.
0.6787.91621559_atAt3g12320hypothetical protein LOC100262734-3e-51At3g28860ABCB19O.I.H.G.S.X.
0.6183.21614876_atAt3g12320hypothetical protein LOC100244642-1e+0At1g73510unknown proteinO.I.H.G.S.X.
0.5879.81615124_atAt3g12320hypothetical protein LOC100258563-8e-5At1g71691GDSL-motif lipase/hydrolase family proteinO.I.H.G.S.X.
0.5779.81615898_atAt3g12320hypothetical protein LOC100247526-6e-2At2g22100RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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