Co-expression analysis

Gene ID ZmAffx.760.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g42591: unknown protein (HF=1e+1)
Module size 9 genes
NF 0.18
%ile 13.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8996.80.98ZmAffx.760.1.A1_atAI734521--1e+1At5g42591unknown proteinO.I.H.G.S.X.
0.4455.70.98Zm.3592.1.S1_atCA401155--1e+1At5g57230-O.I.H.G.S.X.
0.2115.50.99Zm.12015.1.A1_atAY107802.1--5e-6At2g26910PDR4 (PLEIOTROPIC DRUG RESISTANCE 4)O.I.H.G.S.X.
0.1710.60.99ZmAffx.406.13.S1_atAI670444--5e+0At2g40316unknown proteinO.I.H.G.S.X.
0.125.90.98ZmAffx.199.1.S1_atAI668491--7e-1At1g14687AtHB32 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 32)O.I.H.G.S.X.
0.115.30.99Zm.17344.1.S1_atCK370586--4e+0At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.104.60.99Zm.6069.1.A1_a_atAY104047.1--1e-17At2g4184040S ribosomal protein S2 (RPS2C)O.I.H.G.S.X.
0.094.00.99Zm.943.1.A1_atBF729547CID11-1e+0At5g42240scpl42 (serine carboxypeptidase-like 42)O.I.H.G.S.X.
0.072.90.99Zm.13245.1.S1_atAF450481.1CBF3-like protein-2e+0At3g22800leucine-rich repeat family protein / extensin family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.598.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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