Co-expression analysis

Gene ID ZmAffx.755.1.S1_at
Gene name
Homology with ArabidopsisSimilar to Atcg00800: - (HF=1e-27)
Module size 6 genes
NF 0.17
%ile 11.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.98ZmAffx.755.1.S1_atAI745946--1e-27Atcg00800-O.I.H.G.S.X.
0.2928.10.99ZmAffx.977.1.A1_atAI833949--8e-1At4g04630unknown proteinO.I.H.G.S.X.
0.2521.30.99Zm.7540.1.S1_atCF055286hypothetical protein LOC100192075-1e-5At4g29130HXK1 (HEXOKINASE 1)O.I.H.G.S.X.
0.115.30.99Zm.9850.1.A1_atBM332622--2e+0At1g20880RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.104.60.99ZmAffx.717.1.A1_atAI739812--8e-1At3g07565DNA bindingO.I.H.G.S.X.
0.062.30.99ZmAffx.1142.1.A1_atAW399873--2e+0At5g47550cysteine protease inhibitor, putative / cystatin, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.098.6GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the wheat gene, TaAffx.128896.7.S1_at, orthologous to the query gene, ZmAffx.755.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9498.9TaAffx.128896.7.S1_atAtcg00800--2e-9Atcg00800-O.I.H.G.S.X.
0.5475.5TaAffx.49997.2.S1_atAtcg00800Cryptochrome 2-2e+0At4g09030AGP10 (ARABINOGALACTAN PROTEIN 10)O.I.H.G.S.X.
0.5374.9Ta.30654.1.A1_atAtcg00800p0416G11.6 protein-4e-4At2g26430RCY1 (ARGININE-RICH CYCLIN 1)O.I.H.G.S.X.
0.5173.0Ta.6916.3.A1_atAtcg00800--4e+0At4g22460protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.5173.0TaAffx.27148.1.S1_atAtcg00800--4e+0At5g26990drought-responsive family proteinO.I.H.G.S.X.
0.5072.4Ta.16985.2.S1_atAtcg00800--4e+0At4g16141sequence-specific DNA binding / transcription factor/ zinc ion bindingO.I.H.G.S.X.
0.4767.9Ta.4913.2.A1_atAtcg00800--2e-6At5g06530ABC transporter family proteinO.I.H.G.S.X.
0.4767.9Ta.30638.1.A1_s_atAtcg00800hypothetical protein LOC543393-2e-7At5g20350TIP1 (TIP GROWTH DEFECTIVE 1)O.I.H.G.S.X.
0.4666.8AFFX-Ta_CYP86-TA_M_atAtcg00800--O.I.H.G.S.X.
0.4666.8Ta.9024.3.S1_atAtcg00800--5e-12At2g20650zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4464.5AFFX-Ta_CYP86-TA_5_atAtcg00800--O.I.H.G.S.X.
0.4058.4Ta.5052.3.S1_atAtcg00800--3e-1At1g06240unknown proteinO.I.H.G.S.X.
0.3956.1Ta.21490.1.S1_atAtcg00800--5e+0At5g50690AtHSD7 (hydroxysteroid dehydrogenase 7)O.I.H.G.S.X.
0.3753.0Ta.14271.2.A1_atAtcg00800--2e-26At5g46210CUL4 (CULLIN4)O.I.H.G.S.X.
0.3651.9Ta.27797.2.S1_atAtcg00800--1e+0At5g22580-O.I.H.G.S.X.
0.3651.9TaAffx.23406.1.S1_atAtcg00800--9e-4At3g53610ATRAB8O.I.H.G.S.X.
0.3448.1Ta.28828.1.A1_atAtcg00800--1e-5At3g06350MEE32 (MATERNAL EFFECT EMBRYO ARREST 32)O.I.H.G.S.X.
0.3346.9TaAffx.104795.1.S1_atAtcg00800--1e+0At2g30020protein phosphatase 2C, putative / PP2C, putativeO.I.H.G.S.X.
0.3346.9TaAffx.78266.1.S1_atAtcg00800--2e-4At3g25480rhodanese-like domain-containing proteinO.I.H.G.S.X.
0.3244.4Ta.6166.3.S1_atAtcg00800--2e-39At2g19830SNF7.2O.I.H.G.S.X.
0.3142.7TaAffx.104952.1.S1_atAtcg00800--5e-1At2g38780unknown proteinO.I.H.G.S.X.
0.2939.2TaAffx.28146.1.S1_atAtcg00800--2e+1At3g12345unknown proteinO.I.H.G.S.X.
0.2839.2TaAffx.5994.1.S1_atAtcg00800--1e+1At5g41400zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2430.3Ta.28190.2.S1_a_atAtcg00800--7e-2At5g07620protein kinase family proteinO.I.H.G.S.X.
0.2227.1Ta.28818.2.S1_atAtcg00800--3e+0At5g14440-O.I.H.G.S.X.
0.2024.0Ta.7391.1.A1_s_atAtcg00800--5e+0At3g16280DNA binding / transcription factorO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Vitis_vinifera



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