Co-expression analysis

Gene ID ZmAffx.750.1.A1_at
Gene name hypothetical protein LOC100275058
Homology with ArabidopsisSimilar to At5g16200: 50S ribosomal protein-related (HF=9e-1)
Module size 12 genes
NF 0.41
%ile 46.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.00.99ZmAffx.750.1.A1_atAI677184hypothetical protein LOC100275058-9e-1At5g1620050S ribosomal protein-relatedO.I.H.G.S.X.
0.5166.40.99Zm.9660.1.A1_atBM341687--5e+0At4g13095LCR37 (Low-molecular-weight cysteine-rich 37)O.I.H.G.S.X.
0.4861.30.99Zm.13670.1.A1_atAY107037.1hypothetical protein LOC100276497-3e-3At5g34930arogenate dehydrogenaseO.I.H.G.S.X.
0.4658.40.99Zm.14540.2.S1_atAY105526.1RNA-binding region RNP-1-5e+0At3g52105unknown proteinO.I.H.G.S.X.
0.3844.20.99ZmAffx.186.1.A1_atAI668363hypothetical protein LOC100217123-6e-5At5g19690STT3A (STAUROSPORIN AND TEMPERATURE SENSITIVE 3-LIKE A)O.I.H.G.S.X.
0.3641.30.99Zm.17730.1.A1_atCK370416--2e-1At4g33210F-box family protein (FBL15)O.I.H.G.S.X.
0.3336.00.99Zm.3406.1.S1_atAY566301.14-coumarate coenzyme A ligase-7e-2At1g516804CL1 (4-COUMARATE:COA LIGASE 1)O.I.H.G.S.X.
0.3233.40.99Zm.4656.1.A1_atCF635280IDP334 protein-4e-35At1g16890ubiquitin-conjugating enzyme, putativeO.I.H.G.S.X.
0.3233.40.99--O.I.H.G.S.X.
0.3233.40.99Zm.12305.1.A1_atBQ621105DNA binding protein-2e+0At5g53700-O.I.H.G.S.X.
0.2521.30.99Zm.13754.1.S1_atAY105895.1ICE-like protease p20 domain containing protein-8e-6At2g35170MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedO.I.H.G.S.X.
0.2014.20.99Zm.3607.2.A1_atCF637896hypothetical protein LOC100273155-3e-3At5g46800BOU (A BOUT DE SOUFFLE)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.598.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.998.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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