Co-expression analysis

Gene ID ZmAffx.729.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g02450: glycine-rich protein (HF=2e-4)
Module size 7 genes
NF 0.52
%ile 68.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6785.80.98ZmAffx.729.1.S1_atAI740018--2e-4At4g02450glycine-rich proteinO.I.H.G.S.X.
0.9299.20.99Zm.14933.1.A1_a_atCO521741--2e+0At5g25940early nodulin-relatedO.I.H.G.S.X.
0.5775.10.99ZmAffx.1407.1.S1_at40794996-82--4e-1At1g42680myosin-relatedO.I.H.G.S.X.
0.5775.10.99Zm.2011.1.A1_atBG840773cobalt import ATP-binding protein cbiO 2-9e-12At4g33460ATNAP13O.I.H.G.S.X.
0.4455.70.99Zm.10513.2.A1_atAY106791.1--3e-3At1g68390unknown proteinO.I.H.G.S.X.
0.4048.50.99Zm.4898.2.A1_atAY108183.1--6e-11At1g09270IMPA-4 (IMPORTIN ALPHA ISOFORM 4)O.I.H.G.S.X.
0.2622.70.99Zm.8647.1.A1_atBM339399F-box family member-2e+0At5g15530BCCP2 (BIOTIN CARBOXYL CARRIER PROTEIN 2)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.998.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.698.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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