Co-expression analysis

Gene ID ZmAffx.725.1.A1_at
Gene name oxidoreductase
Homology with ArabidopsisSimilar to At5g35900: LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35) (HF=7e+0)
Module size 8 genes
NF 0.47
%ile 58.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7087.00.97ZmAffx.725.1.A1_atAI739939oxidoreductase-7e+0At5g35900LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35)O.I.H.G.S.X.
0.5775.10.98Zm.10125.1.A1_x_atCF628795cytidine/deoxycytidylate deaminase family protein-5e-1At5g29807unknown proteinO.I.H.G.S.X.
0.5065.70.98Zm.12246.1.A1_atBM379517growth inhibition and differentiation-related protein 88-4e-2At5g22120unknown proteinO.I.H.G.S.X.
0.4861.30.97Zm.7914.2.A1_atCF634583GATA transcription factor 25-1e-10At3g21175ZML1 (ZIM-LIKE 1)O.I.H.G.S.X.
0.4658.40.97Zm.8879.1.A1_atBM334135nudix hydrolase 13-3e-9At3g12600atnudt16 (Arabidopsis thaliana Nudix hydrolase homolog 16)O.I.H.G.S.X.
0.3641.30.98Zm.10125.3.A1_x_atBM381172cytidine/deoxycytidylate deaminase family protein-4e+0At1g47265unknown proteinO.I.H.G.S.X.
0.3233.40.97Zm.8599.1.A1_atBM268882hypothetical protein LOC100276622-1e+0At5g66340unknown proteinO.I.H.G.S.X.
0.2622.70.98Zm.9830.2.A1_a_atBM341631hypothetical protein LOC100193377-7e-2At2g20613unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.298.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.997.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.797.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.592.6GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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