Co-expression analysis

Gene ID ZmAffx.712.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g38092: unknown protein (HF=3e+0)
Module size 23 genes
NF 0.22
%ile 17.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6682.30.92ZmAffx.712.1.A1_atAI738386--3e+0At4g38092unknown proteinO.I.H.G.S.X.
0.5166.40.96Zm.1960.1.A1_atAW566154palmitoyltransferase swf1-4e-1At3g04970zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.4759.90.96Zm.1104.1.A1_atBE056041Zea mays MADS8-4e-2At2g03710SEP4 (SEPALLATA 4)O.I.H.G.S.X.
0.4556.40.98ZmAffx.834.1.A1_atAI770566--8e-1At1g54420unknown proteinO.I.H.G.S.X.
0.4048.50.95Zm.9645.1.S1_atAY207047.1ZmMybst1-1e-8At3g16350myb family transcription factorO.I.H.G.S.X.
0.3945.60.98ZmAffx.757.1.A1_atAI745972--3e+0At4g32960unknown proteinO.I.H.G.S.X.
0.3233.40.97Zm.15437.1.S1_atCD219447hypothetical protein LOC100191830-6e+0At5g3767015.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)O.I.H.G.S.X.
0.3233.40.95Zm.14701.1.A1_atCB334376--1e-25At3g03940protein kinase family proteinO.I.H.G.S.X.
0.2928.10.96Zm.18431.1.S1_atCO517527--4e-28At3g21690MATE efflux family proteinO.I.H.G.S.X.
0.2622.70.95Zm.4602.1.A1_atAI737296--1e-1At3g01280VDAC1 (VOLTAGE DEPENDENT ANION CHANNEL 1)O.I.H.G.S.X.
0.2622.70.96Zm.4545.1.A1_atAI734703VAMP-like protein YKT62-9e-18At5g58060YKT61O.I.H.G.S.X.
0.2419.80.97Zm.16824.1.S1_a_atCF602732SAM domain family protein-5e-1At3g07170sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.2419.80.97Zm.1342.1.S1_atBG842254--4e-5At1g23230unknown proteinO.I.H.G.S.X.
0.2318.60.97Zm.15414.1.A1_atCD435566--5e+0At4g01170unknown proteinO.I.H.G.S.X.
0.158.60.96Zm.9328.1.A1_s_atBM26810312-oxo-phytodienoic acid reductase-1e+0At1g76690OPR2O.I.H.G.S.X.
0.158.60.96Zm.13855.1.A1_atAF439731.1glycine cleavage complex T-protein-7e-47At1g11860aminomethyltransferase, putativeO.I.H.G.S.X.
0.147.70.96Zm.18406.1.A1_atCA403928--1e-7At2g37860LCD1 (LOWER CELL DENSITY 1)O.I.H.G.S.X.
0.136.80.96Zm.3612.1.A1_atAY103746.1hypothetical protein LOC100216585-2e-12At4g14710acireductone dioxygenase [iron(II)-requiring]/ metal ion bindingO.I.H.G.S.X.
0.136.80.98Zm.18465.1.A1_atCO530071--1e+1At4g09100zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.125.90.95Zm.13713.1.A1_atAY106520.1hypothetical protein LOC100193720-2e-24At4g3920040S ribosomal protein S25 (RPS25E)O.I.H.G.S.X.
0.125.90.96ZmAffx.1008.1.A1_atAI881386--3e+0At5g19030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.115.30.95Zm.1972.1.A1_atCF674994--2e+1Atcg00790-O.I.H.G.S.X.
0.072.90.96Zm.2150.1.A1_a_atCD977294Hypothetical protein LOC100193916-4e-33At5g20920EIF2 BETAO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.897.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM202298B73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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