Co-expression analysis

Gene ID ZmAffx.706.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g23590: unknown protein (HF=8e-1)
Module size 7 genes
NF 0.51
%ile 64.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.94ZmAffx.706.1.A1_atAI738209--8e-1At1g23590unknown proteinO.I.H.G.S.X.
0.6077.80.94Zm.13737.2.S1_atAI065573hypothetical protein LOC100272721-6e-54At4g08900arginaseO.I.H.G.S.X.
0.5976.10.93Zm.1866.1.A1_atAW498013--5e-7At4g11270transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.5065.70.94Zm.10798.1.A1_atCF003582Hypothetical protein LOC100191405-1e-2At1g26930kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.5065.70.94ZmAffx.1.1.S1_s_atAY722707.1hypothetical LOC542518-5e-51At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)O.I.H.G.S.X.
0.2828.10.94Zm.10799.1.S1_atAY108939.1hypothetical protein LOC100192060-3e+0At5g20110dynein light chain, putativeO.I.H.G.S.X.
0.2521.30.94Zm.14036.1.S1_atX55388.1embryo specific protein1-3e-2At2g40170GEA6 (LATE EMBRYOGENESIS ABUNDANT 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
29.699.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
28.499.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
28.399.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.199.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.199.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.099.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.599.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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