Co-expression analysis

Gene ID ZmAffx.70.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g37780: DC1 domain-containing protein (HF=8e-1)
Module size 6 genes
NF 0.44
%ile 52.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99ZmAffx.70.1.A1_atAI665164--8e-1At2g37780DC1 domain-containing proteinO.I.H.G.S.X.
0.6785.80.99Zm.301.2.A1_atCO521836hypothetical protein LOC100276367-4e-9At2g34510-O.I.H.G.S.X.
0.5065.70.99ZmAffx.788.1.A1_atAI759113--8e-1At4g33925unknown proteinO.I.H.G.S.X.
0.4352.80.99Zm.5425.1.S1_a_atAY105598.1--1e+0At1g08010zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.4352.80.99Zm.2234.1.S1_a_atCO526542hypothetical protein LOC100276749 /// hypothetical protein LOC100276758-2e+1At5g53486unknown proteinO.I.H.G.S.X.
0.1912.80.99Zm.4308.1.A1_atAY112093.1--1e-1At1g08390nucleic acid bindingO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6077.80.98ZmAffx.918.1.S1_atAI782957hypothetical protein LOC100276424-8e-1At3g06750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.6077.80.99Zm.4230.1.S1_atCO523811--4e-5At1g17650GLYR2 (GLYOXYLATE REDUCTASE 2)O.I.H.G.S.X.
0.5775.10.98Zm.4183.1.A1_atAI857198--4e-1At4g03113unknown proteinO.I.H.G.S.X.
0.5775.10.98Zm.869.2.A1_atAI711751Hypothetical protein LOC100192365-6e+0At5g15560unknown proteinO.I.H.G.S.X.
0.5065.70.99Zm.11993.1.A1_atBM382482--4e+0At3g26980MUB4 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 4 PRECURSOR)O.I.H.G.S.X.
0.5065.70.99Zm.2269.1.S1_atCF631922--1e-7At5g51820PGM (PHOSPHOGLUCOMUTASE)O.I.H.G.S.X.
0.4861.30.98Zm.13982.1.S1_atAY104726.1hypothetical protein LOC100272291-2e-17At2g25840OVA4 (ovule abortion 4)O.I.H.G.S.X.
0.4759.90.97Zm.1746.1.A1_a_atBG840562hypothetical protein LOC100278852-8e-8At2g30942unknown proteinO.I.H.G.S.X.
0.4759.90.98Zm.12054.1.A1_atBM416853--5e+0At1g04250AXR3 (AUXIN RESISTANT 3)O.I.H.G.S.X.
0.4658.40.99Zm.1787.1.S1_atAY103670.1hypothetical protein LOC100192020-2e-4At3g12130KH domain-containing protein / zinc finger (CCCH type) family proteinO.I.H.G.S.X.
0.4455.70.96Zm.3534.1.A1_atAW562980--2e-7At4g33690unknown proteinO.I.H.G.S.X.
0.4455.70.98Zm.17757.1.S1_atCK371299polygalacturonase inhibitor 1-1e+0At3g44100MD-2-related lipid recognition domain-containing protein / ML domain-containing proteinO.I.H.G.S.X.
0.4455.70.98Zm.1056.2.A1_atAY106535.1--5e-13At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.4352.80.98Zm.15628.1.S1_atCF628706hypothetical protein LOC100193098-2e-10At3g54320WRI1 (WRINKLED 1)O.I.H.G.S.X.
0.4352.80.98Zm.15314.1.S1_atCF972544--1e-11At3g06080unknown proteinO.I.H.G.S.X.
0.4352.80.99Zm.3419.1.S1_atCF272935thioredoxin h2 protein-1e-1At2g35010ATO1 (Arabidopsis thioredoxin O1)O.I.H.G.S.X.
0.4048.50.98ZmAffx.836.1.A1_atAI770581--2e-1At3g24350SYP32 (SYNTAXIN OF PLANTS 32)O.I.H.G.S.X.
0.4048.50.98Zm.13944.2.S1_atBM380970--7e-17At3g26420ATRZ-1AO.I.H.G.S.X.
0.4048.50.99Zm.10063.1.A1_atBM378869homeobox protein HD1-1e-12At4g32040KNAT5 (KNOTTED1-LIKE HOMEOBOX GENE 5)O.I.H.G.S.X.
0.3945.60.96ZmAffx.122.1.S1_atAI665696Hypothetical protein LOC100217096-8e-1At1g23260MMZ1 (MMS ZWEI HOMOLOGUE 1)O.I.H.G.S.X.
0.3844.20.99Zm.9785.1.S1_atCK371122hypothetical protein LOC100276267-1e-10At5g47320RPS19 (RIBOSOMAL PROTEIN S19)O.I.H.G.S.X.
0.3641.30.98Zm.14591.1.S1_atCF006266triosephosphate isomerase, cytosolic-3e-9At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.
0.3641.30.99Zm.10571.1.A1_atBQ538363hypothetical protein LOC100216835-3e-1At3g60360EDA14 (EMBRYO SAC DEVELOPMENT ARREST 14)O.I.H.G.S.X.
0.3641.30.99Zm.4239.1.A1_atBM080569hypothetical protein LOC100193561-2e+0At5g04820OFP13 (ARABIDOPSIS THALIANA OVATE FAMILY PROTEIN 13)O.I.H.G.S.X.
0.3538.90.97Zm.2817.2.A1_atCB350638hypothetical protein LOC100277525-7e+0At5g66040STR16 (SULFURTRANSFERASE PROTEIN 16)O.I.H.G.S.X.
0.3538.90.98Zm.2267.1.A1_atAY105804.1Hypothetical protein LOC100216854-7e-7At1g79860ROPGEF12 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 12)O.I.H.G.S.X.
0.3336.00.96Zm.9144.1.A1_atBM340758copper chaperone for superoxide dismutase-3e-5At1g12520ATCCS (COPPER CHAPERONE FOR SOD1)O.I.H.G.S.X.
0.3336.00.97ZmAffx.944.1.A1_atAI820414--2e-10At3g57150NAP57 (Arabidopsis thaliana homologue of NAP57)O.I.H.G.S.X.
0.3336.00.98Zm.10375.1.S1_atBQ703821--2e-17At2g35360ubiquitin family proteinO.I.H.G.S.X.
0.3336.00.99Zm.10497.1.S1_atBQ485594--4e-1At1g52040MBP1 (MYROSINASE-BINDING PROTEIN 1)O.I.H.G.S.X.
0.3233.40.98Zm.10221.1.A1_atCF635822UPF0497 membrane protein 8-2e+0At4g16750DRE-binding transcription factor, putativeO.I.H.G.S.X.
0.3233.40.98Zm.12666.2.S1_atAY536126.1meg6 protein-4e-2At1g60650glycine-rich RNA-binding protein, putativeO.I.H.G.S.X.
0.3131.60.98ZmAffx.1202.1.A1_atBE128848--5e-2At4g27350unknown proteinO.I.H.G.S.X.
0.3131.60.99Zm.16146.1.A1_atCF632443hypothetical protein LOC100192115-3e+0At5g47630mtACP3 (mitochondrial acyl carrier protein 3)O.I.H.G.S.X.
0.3131.60.99Zm.18237.1.S1_atCN845290mitochondrial carrier protein CGI-69-3e-6At4g27940mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.2928.10.98Zm.1808.1.A1_atAW498373Hypothetical protein LOC100191963-2e+0At2g34585unknown proteinO.I.H.G.S.X.
0.2724.60.99Zm.3699.7.S1_a_atCK371636ribosomal proteinS6-1e-60At4g31700RPS6 (RIBOSOMAL PROTEIN S6)O.I.H.G.S.X.
0.2622.70.97Zm.16958.2.A1_x_atAW331652hypothetical protein LOC100193269-8e-5At5g1613040S ribosomal protein S7 (RPS7C)O.I.H.G.S.X.
0.2622.70.98Zm.2918.1.A1_atBM338680threonine endopeptidase-2e+0At4g01150unknown proteinO.I.H.G.S.X.
0.2521.30.97Zm.2825.4.A1_atCF011665hypothetical protein LOC100192808-6e-41At1g22450COX6B (CYTOCHROME C OXIDASE 6B)O.I.H.G.S.X.
0.2521.30.98Zm.8991.1.A1_atBM350233hypothetical protein LOC100272589-1e-14At2g32600hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.597.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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