| Gene ID | ZmAffx.70.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At2g37780: DC1 domain-containing protein (HF=8e-1) |
| Module size | 6 genes |
| NF | 0.44 |
| %ile | 52.1 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.99 | ZmAffx.70.1.A1_at | AI665164 | - | - | 8e-1 | At2g37780 | DC1 domain-containing protein | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.99 | Zm.301.2.A1_at | CO521836 | hypothetical protein LOC100276367 | - | 4e-9 | At2g34510 | - | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.99 | ZmAffx.788.1.A1_at | AI759113 | - | - | 8e-1 | At4g33925 | unknown protein | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.99 | Zm.5425.1.S1_a_at | AY105598.1 | - | - | 1e+0 | At1g08010 | zinc finger (GATA type) family protein | O.I. | H.G. | S.X. | |
| 0.43 | 52.8 | 0.99 | Zm.2234.1.S1_a_at | CO526542 | hypothetical protein LOC100276749 /// hypothetical protein LOC100276758 | - | 2e+1 | At5g53486 | unknown protein | O.I. | H.G. | S.X. | |
| 0.19 | 12.8 | 0.99 | Zm.4308.1.A1_at | AY112093.1 | - | - | 1e-1 | At1g08390 | nucleic acid binding | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.5 | 97.8 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.3 | 97.8 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.1 | 97.7 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.9 | 97.7 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.8 | 97.2 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.8 | 97.2 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.5 | 97.1 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.3 | 96.9 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.7 | 96.5 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.2 | 96.0 | GSM320465 | protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.82 | 95.0 | Os05g0392000 | At2g37780 | - | Hypothetical protein | 7e-3 | At1g69180 | CRC (CRABS CLAW) | O.I. | H.G. | S.X. | |
| 0.49 | 64.4 | Os02g0290300 | At2g37780 | - | Peptidase S9A, prolyl oligopeptidase, N-terminalbeta-propeller domain containing protein | 4e-10 | At1g04140 | transducin family protein / WD-40 repeat family protein | O.I. | H.G. | S.X. | |
| 0.46 | 60.9 | Os01g0575500 | At2g37780 | - | Stomatal cytokinesis defective | 6e-19 | At1g49040 | SCD1 (STOMATAL CYTOKINESIS-DEFECTIVE 1) | O.I. | H.G. | S.X. | |
| 0.43 | 55.4 | Os03g0352500 | At2g37780 | - | Hypothetical protein | 6e-1 | At5g40570 | surfeit locus protein 2 family protein / SURF2 family protein | O.I. | H.G. | S.X. | |
| 0.42 | 53.9 | Os06g0105600 | At2g37780 | - | Hypothetical protein | 3e-4 | At5g47480 | unknown protein | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | Os02g0554000 | At2g37780 | - | CW-type Zn-finger domain containing protein | 8e-1 | At4g14165 | F-box family protein-related | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | Os08g0295000 | At2g37780 | - | Conserved hypothetical protein | 5e-1 | At1g76065 | - | O.I. | H.G. | S.X. | |
| 0.41 | 52.4 | Os10g0464100 | At2g37780 | - | WD40-like domain containing protein | 2e-8 | At2g20330 | transducin family protein / WD-40 repeat family protein | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os04g0452400 | At2g37780 | - | Ubiquitin-specific protease 4 (UBP4)(At2g22310/T26C19.3) | 1e-42 | At2g22310 | ATUBP4 (ARABIDOPSIS THALIANA UBIQUITIN-SPECIFIC PROTEASE 4) | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | Os09g0525600 | At2g37780 | - | UBX domain containing protein | 2e-11 | At4g11740 | SAY1 | O.I. | H.G. | S.X. | |
| 0.34 | 40.0 | Os01g0367300 | At2g37780 | - | Conserved hypothetical protein | 2e+0 | At2g19040 | RALFL12 (RALF-LIKE 12) | O.I. | H.G. | S.X. | |
| 0.33 | 38.8 | Os03g0788300 | At2g37780 | - | - | 3e-2 | At5g07600 | oleosin / glycine-rich protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os01g0737800 | At2g37780 | - | Protein farnesyltransferase beta subunit (EC2.5.1.58) (CAAX farnesyltransferase beta subunit) (RASproteins prenyltransferase beta) (FTase-beta) | 1e-5 | At5g40280 | ERA1 (ENHANCED RESPONSE TO ABA 1) | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os03g0794800 | At2g37780 | - | XRN3 | 2e-25 | At1g54490 | XRN4 (EXORIBONUCLEASE 4) | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os07g0295200 | At2g37780 | - | Protein of unknown function DUF167 family protein | 1e-29 | At5g63440 | unknown protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os04g0672200 | At2g37780 | - | Conserved hypothetical protein | 2e-3 | At2g01340 | unknown protein | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | Os04g0401300 | At2g37780 | - | CBS domain containing protein | 1e-2 | At2g23320 | WRKY15 | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | Os02g0781800 | At2g37780 | - | WD40-like domain containing protein | 6e-10 | At3g54190 | - | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | Os11g0157100 | At2g37780 | - | Cyclin domain containing protein | 4e-22 | At4g19600 | CYCT1 | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | Os12g0110000 | At2g37780 | - | Regulatory associated protein of TOR familyprotein | 3e-52 | At3g08850 | RAPTOR1 | O.I. | H.G. | S.X. | |
| 0.28 | 31.1 | Os01g0337600 | At2g37780 | - | Protein of unknown function DUF625 domaincontaining protein | 8e-4 | At3g06670 | binding | O.I. | H.G. | S.X. | |
| 0.28 | 31.1 | Os02g0179900 | At2g37780 | - | Negative elongation factor E (NELF-E) (RDprotein). Splice isoform 2 | 7e-40 | At5g25060 | RNA recognition motif (RRM)-containing protein | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os08g0427300 | At2g37780 | - | Conserved hypothetical protein | 3e-7 | At1g16020 | unknown protein | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os07g0655500 | At2g37780 | - | PWWP domain containing protein | 2e-1 | At2g48160 | - | O.I. | H.G. | S.X. | |
| 0.23 | 21.2 | Os07g0632600 | At2g37780 | - | Heat shock protein DnaJ, N-terminal domaincontaining protein | 1e+0 | At4g29080 | PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2) | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os06g0208300 | At2g37780 | - | Translation protein SH3-like domain containingprotein | 2e-8 | At2g34210 | structural constituent of ribosome / transcription elongation regulator/ transcription initiation factor | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | Os12g0102400 | At2g37780 | - | RNA-binding region RNP-1 (RNA recognition motif)domain containing protein | 6e-16 | At3g45630 | RNA recognition motif (RRM)-containing protein | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | Os07g0495900 | At2g37780 | - | Regulator of nonsense transcripts 1 homolog | 1e-6 | At5g47010 | LBA1 (LOW-LEVEL BETA-AMYLASE 1) | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | Os12g0165000 | At2g37780 | - | WD40-like domain containing protein | 3e+0 | At3g05090 | transducin family protein / WD-40 repeat family protein | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os06g0206100 | At2g37780 | - | Protein of unknown function DUF1296 family protein | 4e-4 | At3g13990 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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