Co-expression analysis

Gene ID ZmAffx.70.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At2g37780: DC1 domain-containing protein (HF=8e-1)
Module size 6 genes
NF 0.44
%ile 52.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99ZmAffx.70.1.A1_atAI665164--8e-1At2g37780DC1 domain-containing proteinO.I.H.G.S.X.
0.6785.80.99Zm.301.2.A1_atCO521836hypothetical protein LOC100276367-4e-9At2g34510-O.I.H.G.S.X.
0.5065.70.99ZmAffx.788.1.A1_atAI759113--8e-1At4g33925unknown proteinO.I.H.G.S.X.
0.4352.80.99Zm.5425.1.S1_a_atAY105598.1--1e+0At1g08010zinc finger (GATA type) family proteinO.I.H.G.S.X.
0.4352.80.99Zm.2234.1.S1_a_atCO526542hypothetical protein LOC100276749 /// hypothetical protein LOC100276758-2e+1At5g53486unknown proteinO.I.H.G.S.X.
0.1912.80.99Zm.4308.1.A1_atAY112093.1--1e-1At1g08390nucleic acid bindingO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.597.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.597.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.396.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.67883.1.S1_at, orthologous to the query gene, ZmAffx.70.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7589.5GmaAffx.67883.1.S1_atAt2g37780--1e-15At1g76690OPR2O.I.H.G.S.X.
0.3548.6GmaAffx.4925.1.S1_atAt2g37780--1e+0At3g21570unknown proteinO.I.H.G.S.X.
0.3346.1GmaAffx.93017.1.S1_atAt2g37780--3e-4At2g26750epoxide hydrolase, putativeO.I.H.G.S.X.
0.2329.9GmaAffx.73273.2.S1_s_atAt2g37780--2e-2At4g24380unknown proteinO.I.H.G.S.X.
0.2126.6GmaAffx.92391.1.S1_atAt2g37780--9e-2At2g23040unknown proteinO.I.H.G.S.X.
0.2025.1GmaAffx.65360.1.S1_atAt2g37780--4e-1At2g30540glutaredoxin family proteinO.I.H.G.S.X.
0.1923.7GmaAffx.88251.1.S1_s_atAt2g37780--2e-4At2g26750epoxide hydrolase, putativeO.I.H.G.S.X.
0.1923.7GmaAffx.69213.2.S1_atAt2g37780--3e-6At4g29180leucine-rich repeat protein kinase, putativeO.I.H.G.S.X.
0.1923.7GmaAffx.64029.1.S1_atAt2g37780--6e-2At3g23680F-box family protein-relatedO.I.H.G.S.X.
0.1822.3GmaAffx.23827.1.S1_atAt2g37780--3e-10At3g60100CSY5 (citrate synthase 5)O.I.H.G.S.X.
0.1518.7Gma.5863.1.S1_atAt2g37780NADPH:isoflavone reductase-8e-7At1g75290oxidoreductase, acting on NADH or NADPHO.I.H.G.S.X.
0.1316.3Gma.16706.1.S1_s_atAt2g37780--6e-20At3g60100CSY5 (citrate synthase 5)O.I.H.G.S.X.
0.1215.1GmaAffx.88320.1.S1_atAt2g37780--5e+0At5g0949040S ribosomal protein S15 (RPS15B)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage