Co-expression analysis

Gene ID ZmAffx.655.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g31320: auxin-responsive protein, putative / small auxin up RNA (SAUR_C) (HF=8e-1)
Module size 13 genes
NF 0.48
%ile 59.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6179.50.86ZmAffx.655.1.A1_atAI715083--8e-1At4g31320auxin-responsive protein, putative / small auxin up RNA (SAUR_C)O.I.H.G.S.X.
0.5775.10.90RPTR-Zm-J01347-4_atRPTR-Zm-J01347-4---O.I.H.G.S.X.
0.5369.10.90RPTR-Zm-J01636-1_atRPTR-Zm-J01636-1---O.I.H.G.S.X.
0.5369.10.89Zm.1638.1.S1_atCF628096hypothetical protein LOC100192625-2e-15At4g2709060S ribosomal protein L14 (RPL14B)O.I.H.G.S.X.
0.5369.10.93RPTR-Zm-X17220-1_atRPTR-Zm-X17220-1---O.I.H.G.S.X.
0.5267.30.94Zm.12244.2.S1_atAI668243--9e-1At5g46940invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.4861.30.94Zm.1818.1.S1_a_atBM073458hypothetical protein LOC100194358-5e+0At5g48545histidine triad family protein / HIT family proteinO.I.H.G.S.X.
0.4759.90.91Zm.16892.3.S1_a_atCB281906calmodulin binding protein-5e-3At3g22190IQD5 (IQ-domain 5)O.I.H.G.S.X.
0.4455.70.88ZmAffx.328.1.A1_atAI670510--3e+0At3g07510unknown proteinO.I.H.G.S.X.
0.4455.70.92Zm.654.1.A1_atAY029561.1hypothetical LOC542071-1e-3At5g35330MBD02 (METHYL-CPG-BINDING DOMAIN PROTEIN 02)O.I.H.G.S.X.
0.4048.50.92RPTR-Zm-J01347-2_atRPTR-Zm-J01347-2---O.I.H.G.S.X.
0.3437.20.90RPTR-Zm-J01347-1_atRPTR-Zm-J01347-1---O.I.H.G.S.X.
0.3336.00.90Zm.16502.5.A1_atAI586439hypothetical protein LOC100280237-1e-12At5g61780tudor domain-containing protein / nuclease family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.399.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.297.4GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.197.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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