Co-expression analysis

Gene ID	ZmAffx.647.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At2g28500: LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11) (HF=3e+0)
Module size	7 genes
NF	0.41
%ile	47.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	99.2	0.77	ZmAffx.647.1.S1_at	AI715075	-	-	3e+0	At2g28500	LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11)	O.I.	H.G.	S.X.	Please select
0.44	55.7	1.00	RPTR-Zm-X17220-1_at	RPTR-Zm-X17220-1	-	-			-	O.I.	H.G.	S.X.	Please select
0.44	55.7	1.00	RPTR-Zm-J01347-4_at	RPTR-Zm-J01347-4	-	-			-	O.I.	H.G.	S.X.	Please select
0.44	55.7	1.00	RPTR-Zm-J01636-1_at	RPTR-Zm-J01636-1	-	-			-	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.80	ZmAffx.313.1.S1_at	AI670495	-	-	3e+0	At3g49520	F-box family protein	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.81	ZmAffx.315.1.A1_x_at	AI670497	-	-	1e+1	At5g22240	OFP10	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.87	ZmAffx.328.1.A1_at	AI670510	-	-	3e+0	At3g07510	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.1	98.8	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.6	98.7	GSM320468	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320472	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320470	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320471	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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