Co-expression analysis

Gene ID ZmAffx.645.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g33480: ANAC041 (Arabidopsis NAC domain containing protein 41) (HF=1e+1)
Module size 6 genes
NF 0.47
%ile 57.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.83ZmAffx.645.1.S1_atAI715073--1e+1At2g33480ANAC041 (Arabidopsis NAC domain containing protein 41)O.I.H.G.S.X.
0.6179.50.83Zm.6434.1.A1_atCO532612hypothetical protein LOC100274024-3e-1At2g36295unknown proteinO.I.H.G.S.X.
0.5369.10.82Zm.14051.2.S1_a_atAI676871hypothetical protein LOC100217091-2e-1At4g08691unknown proteinO.I.H.G.S.X.
0.3844.20.82ZmAffx.297.1.S1_atAI670430--3e+0At1g38950unknown proteinO.I.H.G.S.X.
0.2928.10.85ZmAffx.618.1.S1_atAI715046--1e+1At5g46940invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.2115.50.84ZmAffx.627.1.S1_atAI715055--8e-1At5g53650unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
28.199.7GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage