Co-expression analysis

Gene ID ZmAffx.619.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At3g30260: AGL79 (AGAMOUS-LIKE 79) (HF=8e-1)
Module size 31 genes
NF 0.26
%ile 22.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.69ZmAffx.619.1.S1_atAI715047--8e-1At3g30260AGL79 (AGAMOUS-LIKE 79)O.I.H.G.S.X.
0.4455.70.77ZmAffx.667.1.A1_atAI734359tetracycline transporter protein-3e+0At3g42970unknown proteinO.I.H.G.S.X.
0.4149.70.77ZmAffx.351.1.A1_atAI670538--2e+1At5g40020pathogenesis-related thaumatin family proteinO.I.H.G.S.X.
0.4048.50.80ZmAffx.1322.1.S1_at40794996-146--2e-1At3g30520unknown proteinO.I.H.G.S.X.
0.4048.50.78ZmAffx.619.1.A1_atAI715047--8e-1At3g30260AGL79 (AGAMOUS-LIKE 79)O.I.H.G.S.X.
0.3945.60.83ZmAffx.303.1.A1_atAI670436--1e+1At5g07700MYB76 (myb domain protein 76)O.I.H.G.S.X.
0.3945.60.76ZmAffx.117.1.A1_atAI665629serine/threonine-protein kinase NAK-8e+0At3g12835unknown proteinO.I.H.G.S.X.
0.3844.20.78ZmAffx.313.1.S1_atAI670495--3e+0At3g49520F-box family proteinO.I.H.G.S.X.
0.3131.60.81ZmAffx.371.1.A1_atAI673886hypothetical protein LOC100276677-8e-1At4g22220ISU1O.I.H.G.S.X.
0.3029.80.83ZmAffx.415.1.A1_atAI670503--1e+1At5g67450AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1)O.I.H.G.S.X.
0.2928.10.83Zm.10034.1.S1_atCK370678cyclin-dependent kinase inhibitor 2-3e+0At5g35603unknown proteinO.I.H.G.S.X.
0.2828.10.78ZmAffx.368.1.S1_atAI673859--2e+0At5g62680proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.2724.60.79ZmAffx.43.1.S1_atAI664875--1e-5At5g06830unknown proteinO.I.H.G.S.X.
0.2622.70.83Zm.13437.2.S1_atAY104220.1hypothetical protein LOC100273700-2e-4At1g43670fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeO.I.H.G.S.X.
0.2622.70.85ZmAffx.424.1.A1_atAI676856--3e+0At5g29807unknown proteinO.I.H.G.S.X.
0.2521.30.86ZmAffx.366.1.A1_atAI673846--5e+0At3g63350AT-HSFA7BO.I.H.G.S.X.
0.2318.60.79ZmAffx.251.1.S1_atAI670269--3e+0At5g14000anac084 (Arabidopsis NAC domain containing protein 84)O.I.H.G.S.X.
0.2318.60.81ZmAffx.914.1.S1_atAI770970protein kinase APK1A-2e-20At5g13160PBS1 (avrPphB susceptible 1)O.I.H.G.S.X.
0.2216.90.80ZmAffx.369.1.A1_atAI673865adenosine 5'-phosphosulfate reductase 3 /// hypothetical protein LOC100217025-2e-1At3g44710unknown proteinO.I.H.G.S.X.
0.2115.50.85ZmAffx.328.1.A1_atAI670510--3e+0At3g07510unknown proteinO.I.H.G.S.X.
0.2115.50.86ZmAffx.25.1.S1_atAI621965Translation initiation factor IF-2-like-3e+0At1g10230ASK18 (ARABIDOPSIS SKP1-LIKE 18)O.I.H.G.S.X.
0.2014.20.84ZmAffx.25.1.A1_atAI621965translation initiation factor IF-2-like-3e+0At1g10230ASK18 (ARABIDOPSIS SKP1-LIKE 18)O.I.H.G.S.X.
0.2014.20.84ZmAffx.642.1.A1_atAI715070--2e-1At1g62190small conjugating protein ligaseO.I.H.G.S.X.
0.2014.20.86Zm.13910.1.S1_x_atAF099367.1R2R3MYB-domain protein-2e-1At4g01680MYB55 (myb domain protein 55)O.I.H.G.S.X.
0.1912.80.82ZmAffx.428.1.A1_atAI676868hypothetical protein LOC100193500-2e-1At3g18630uracil DNA glycosylase family proteinO.I.H.G.S.X.
0.1811.60.81ZmAffx.410.1.A1_atAI670262--2e-1At5g61630unknown proteinO.I.H.G.S.X.
0.1811.60.79ZmAffx.337.1.S1_atAI670524--3e+1At3g24510-O.I.H.G.S.X.
0.158.60.78ZmAffx.423.1.A1_atAI676855--1e+1At5g10110unknown proteinO.I.H.G.S.X.
0.136.80.83ZmAffx.347.1.A1_atAI670534--1e+1At4g01995unknown proteinO.I.H.G.S.X.
0.125.90.87Zm.13913.1.S1_s_atAF073332.1ROA protein 1 /// replication origin activator 2 /// replication origin activator 4-8e-11At5g46280DNA replication licensing factor, putativeO.I.H.G.S.X.
0.094.00.90ZmAffx.338.1.S1_atAI670525--3e+0At4g12460ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.098.7GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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