Co-expression analysis

Gene ID ZmAffx.60.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g41650: unknown protein (HF=8e-1)
Module size 47 genes
NF 0.34
%ile 34.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.99ZmAffx.60.1.S1_atAI665094--8e-1At2g41650unknown proteinO.I.H.G.S.X.
0.5469.80.99ZmAffx.219.1.A1_atAI670227--3e+0At3g30430F-box family proteinO.I.H.G.S.X.
0.4759.90.99Zm.5969.2.A1_a_atAI629909hypothetical protein LOC100272999 /// hypothetical protein LOC100273990-2e+0At5g59030COPT1 (copper transporter 1)O.I.H.G.S.X.
0.4759.90.99Zm.3983.2.S1_atAI820263--8e-1At3g60510enoyl-CoA hydratase/isomerase family proteinO.I.H.G.S.X.
0.4759.90.99Zm.10553.1.A1_atCD441187--4e+0At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
0.4658.40.99Zm.13322.1.A1_atBM895136--1e+0At1g52855unknown proteinO.I.H.G.S.X.
0.4556.40.99ZmAffx.109.1.S1_atAI665560--8e-1At4g09270unknown proteinO.I.H.G.S.X.
0.4556.40.99Zm.18873.1.A1_atAY103904.1--4e-1At5g42232-O.I.H.G.S.X.
0.4455.70.99Zm.16325.1.A1_atCF243460hypothetical protein LOC100276031-3e-3At1g29840esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.4455.70.99Zm.14692.1.A1_s_atBQ539260hypothetical protein LOC100276042-5e+0At1g09195-O.I.H.G.S.X.
0.4149.70.99Zm.9508.1.A1_atBM351117--9e-3At5g28040transcription regulatorO.I.H.G.S.X.
0.3945.60.99Zm.6036.1.S1_atAY110222.1cofactor required for Sp1 transcriptional activation subunit 9-1e-4At5g03500transcription coactivatorO.I.H.G.S.X.
0.3945.60.99Zm.4202.1.A1_atCB350777--6e-3At3g25577unknown proteinO.I.H.G.S.X.
0.3844.20.99ZmAffx.87.1.A1_atAI665344--1e+1At5g39330unknown proteinO.I.H.G.S.X.
0.3844.20.99Zm.1693.1.A1_atBM382165--4e-3At3g55670-O.I.H.G.S.X.
0.3844.20.99Zm.8812.2.A1_atBM267970hypothetical protein LOC100273324-5e-2At1g16560Per1-like family proteinO.I.H.G.S.X.
0.3742.30.99ZmAffx.774.1.A1_atAI746198hypothetical protein LOC100279501-2e+0At2g41000heat shock protein bindingO.I.H.G.S.X.
0.3742.30.99Zm.1413.1.S1_atBF729282--6e+0At2g11005glycine-rich proteinO.I.H.G.S.X.
0.3641.30.99ZmAffx.840.1.A1_atAI770592--2e-1At1g36940unknown proteinO.I.H.G.S.X.
0.3538.90.99ZmAffx.1489.1.S1_at11990232-46--0Atcg00680-O.I.H.G.S.X.
0.3538.90.99Zm.17248.3.A1_x_atAW057073hypothetical protein LOC100280404-7e-11At5g37510EMB1467 (embryo defective 1467)O.I.H.G.S.X.
0.3437.20.99Zm.14116.1.S1_atAY107756.1--6e-14At4g17020transcription factor-relatedO.I.H.G.S.X.
0.3437.20.99Zm.2864.1.S1_atCA828566nucleotide-binding protein 1-4e-33At5g50960NBP35 (NUCLEOTIDE BINDING PROTEIN 35)O.I.H.G.S.X.
0.3437.20.99Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.3437.20.99Zm.41.1.S1_atAI600908calcium dependent protein kinase1-1e-16At2g46700calcium-dependent protein kinase, putative / CDPK, putativeO.I.H.G.S.X.
0.3437.20.99Zm.7016.1.A1_a_atAY103859.1hypothetical protein LOC100275203 /// hypothetical protein LOC100276238-3e-1At5g44610MAP18 (Microtubule-associated Protein 18)O.I.H.G.S.X.
0.3336.00.99Zm.4326.1.A1_atAI711615hypothetical protein AY106635-5e+0At5g15120unknown proteinO.I.H.G.S.X.
0.3233.40.99Zm.16798.2.A1_a_atCF633780dynamin-related protein 1A-3e-14At5g42080ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN)O.I.H.G.S.X.
0.3233.40.99Zm.2910.1.S1_a_atCK145276hypothetical protein LOC100217030 /// hypothetical protein LOC100277437-8e+0At5g02920ubiquitin-protein ligaseO.I.H.G.S.X.
0.3233.40.99Zm.14471.1.A1_a_atCF01721060S ribosomal protein L7-1-8e-31At2g4412060S ribosomal protein L7 (RPL7C)O.I.H.G.S.X.
0.3233.40.99Zm.10271.1.S1_atCA452443abhydrolase domain-containing protein 5-9e-35At4g24160hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.3131.60.99ZmAffx.645.1.A1_atAI715073--1e+1At2g33480ANAC041 (Arabidopsis NAC domain containing protein 41)O.I.H.G.S.X.
0.2928.10.99ZmAffx.475.1.A1_atAI677510--2e-1At1g74210glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.2928.10.99Zm.13940.1.S1_atAI677337hypothetical protein LOC100193246-1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.2928.10.99Zm.13664.1.S1_atBG836397--6e-17At3g15610transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2928.10.99Zm.13228.1.S1_atCA452580LHT1-5e+0At4g17585unknown proteinO.I.H.G.S.X.
0.2828.10.99Zm.3169.5.S1_x_atAI739763minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.2828.10.99Zm.13745.1.S1_atCK986027--2e-25At5g25150TAF5 (TBP-ASSOCIATED FACTOR 5)O.I.H.G.S.X.
0.2828.10.99Zm.34.2.S1_atAY103769.1--1e-13At5g44200CBP20 (CAP-BINDING PROTEIN 20)O.I.H.G.S.X.
0.2828.10.99Zm.18090.1.S1_atCK986006golgi SNARE 12 protein-1e-8At1g15880GOS11 (golgi snare 11)O.I.H.G.S.X.
0.2724.60.99ZmAffx.1136.1.A1_atAW331220--3e+0At4g15460glycine-rich proteinO.I.H.G.S.X.
0.2622.70.99Zm.17818.1.A1_atCK145213--6e+0At5g52470FIB1 (FIBRILLARIN 1)O.I.H.G.S.X.
0.2622.70.99Zm.11787.1.A1_a_atBM380772--6e+0At5g17523-O.I.H.G.S.X.
0.2521.30.99ZmAffx.105.1.S1_atAI665537--3e+0At4g20000VQ motif-containing proteinO.I.H.G.S.X.
0.2521.30.99Zm.8632.1.A1_atBM268513--5e+0At3g55672-O.I.H.G.S.X.
0.2419.80.99ZmAffx.1052.1.S1_atAI881839KH domain containing protein-3e+0At1g75090methyladenine glycosylase family proteinO.I.H.G.S.X.
0.2115.50.99Zm.1619.1.A1_atBE012216--1e+1Atcg00760-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.697.6GSM253270ZM_4.5d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
6.597.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320441protocol: mRNA - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM253268ZM_4.5d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.396.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM202309Mo17 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
4.095.8GSM253256ZM_2d_Mock_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.995.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM202314Mo17 19 day after pollination embryo tissue, biological replicate 2GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.895.5GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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