Co-expression analysis

Gene ID ZmAffx.575.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g77590: LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9) (HF=1e-2)
Module size 6 genes
NF 0.15
%ile 10.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.99ZmAffx.575.1.A1_atAI714774--1e-2At1g77590LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9)O.I.H.G.S.X.
0.3538.90.99ZmAffx.1200.1.S1_atBE128804hypothetical protein LOC100191370-4e+0At5g11630unknown proteinO.I.H.G.S.X.
0.2014.20.99Zm.13855.1.S1_atAF439731.1glycine cleavage complex T-protein-7e-47At1g11860aminomethyltransferase, putativeO.I.H.G.S.X.
0.147.70.99ZmAffx.475.1.A1_atAI677510--2e-1At1g74210glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.094.00.99ZmAffx.976.1.A1_atAI833931--1e-2At4g23880unknown proteinO.I.H.G.S.X.
0.072.90.99Zm.3608.1.A1_atBG842128protein lap1-6e-4At3g11330leucine-rich repeat family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.099.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.199.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.899.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.799.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.299.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.099.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.299.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.82596.1.A1_at, orthologous to the query gene, ZmAffx.575.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8697.4PtpAffx.82596.1.A1_atAt1g77590hypothetical protein-2e-1At4g15417ATRTL1 (ARABIDOPSIS THALIANA RNASEIII-LIKE 1)O.I.H.G.S.X.
0.3964.6PtpAffx.36261.2.S1_atAt1g77590hypothetical protein-3e-2At1g60800NIK3 (NSP-INTERACTING KINASE 3)O.I.H.G.S.X.
0.2645.2PtpAffx.2386.1.S1_atAt1g77590hypothetical protein-4e-4At2g40880ATCYSA (CYSTATIN A)O.I.H.G.S.X.
0.2340.5PtpAffx.40412.1.S1_atAt1g77590hypothetical protein-8e+0At5g64810WRKY51O.I.H.G.S.X.
0.2136.5PtpAffx.207111.1.S1_x_atAt1g77590hypothetical protein-2e-34At5g65000nucleotide-sugar transporter family proteinO.I.H.G.S.X.
0.1932.7Ptp.4926.1.S1_s_atAt1g77590hypothetical protein-2e-16At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.H.G.S.X.
0.1830.8Ptp.6411.2.S1_a_atAt1g77590hypothetical protein-7e-9At2g40060protein binding / structural moleculeO.I.H.G.S.X.
0.1830.8PtpAffx.162259.1.S1_s_atAt1g77590hypothetical protein-2e-39At3g52880monodehydroascorbate reductase, putativeO.I.H.G.S.X.
0.1729.1PtpAffx.162259.1.S1_atAt1g77590hypothetical protein-2e-39At3g52880monodehydroascorbate reductase, putativeO.I.H.G.S.X.
0.1626.9Ptp.3882.1.S1_atAt1g77590hypothetical protein-2e-19At5g47120ATBI1 (BAX INHIBITOR 1)O.I.H.G.S.X.
0.1525.3PtpAffx.454.7.A1_s_atAt1g77590hypothetical protein-2e-100At3g56800CAM3 (CALMODULIN 3)O.I.H.G.S.X.
0.1525.3PtpAffx.2533.1.A1_atAt1g77590hypothetical protein-9e-6At5g13810glutaredoxin family proteinO.I.H.G.S.X.
0.1423.5Ptp.4925.1.S1_s_atAt1g77590hypothetical protein-1e-66At1g17290AlaAT1 (ALANINE AMINOTRANSFERAS)O.I.H.G.S.X.
0.1423.5PtpAffx.66318.1.S1_a_atAt1g77590hypothetical protein-1e-26At1g42990ATBZIP60 (BASIC REGION/LEUCINE ZIPPER MOTIF 60)O.I.H.G.S.X.
0.1321.6PtpAffx.207111.1.S1_atAt1g77590hypothetical protein-2e-34At5g65000nucleotide-sugar transporter family proteinO.I.H.G.S.X.
0.1219.6Ptp.2161.1.S1_s_atAt1g77590Sec61 transport protein-1e-12At1g29310P-P-bond-hydrolysis-driven protein transmembrane transporterO.I.H.G.S.X.
0.1219.6PtpAffx.3400.1.S1_atAt1g77590hypothetical protein-3e-6At1g74450unknown proteinO.I.H.G.S.X.
0.1118.1PtpAffx.5094.2.S1_s_atAt1g77590hypothetical protein-6e-13At1g70782CPuORF28 (Conserved peptide upstream open reading frame 28)O.I.H.G.S.X.
0.1016.3PtpAffx.141467.1.S1_s_atAt1g77590hypothetical protein-4e-53At1g60430ARPC3 (actin-related protein C3)O.I.H.G.S.X.
0.0914.6PtpAffx.40192.1.A1_s_atAt1g77590hypothetical protein-2e+0At3g17020universal stress protein (USP) family proteinO.I.H.G.S.X.
0.0812.9Ptp.1463.3.A1_s_atAt1g77590hypothetical protein-1e-4At4g19200proline-rich family proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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