Co-expression analysis

Gene ID ZmAffx.575.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g77590: LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9) (HF=1e-2)
Module size 6 genes
NF 0.15
%ile 10.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.99ZmAffx.575.1.A1_atAI714774--1e-2At1g77590LACS9 (LONG CHAIN ACYL-COA SYNTHETASE 9)O.I.H.G.S.X.
0.3538.90.99ZmAffx.1200.1.S1_atBE128804hypothetical protein LOC100191370-4e+0At5g11630unknown proteinO.I.H.G.S.X.
0.2014.20.99Zm.13855.1.S1_atAF439731.1glycine cleavage complex T-protein-7e-47At1g11860aminomethyltransferase, putativeO.I.H.G.S.X.
0.147.70.99ZmAffx.475.1.A1_atAI677510--2e-1At1g74210glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.094.00.99ZmAffx.976.1.A1_atAI833931--1e-2At4g23880unknown proteinO.I.H.G.S.X.
0.072.90.99Zm.3608.1.A1_atBG842128protein lap1-6e-4At3g11330leucine-rich repeat family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.099.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
21.199.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.899.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.799.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.299.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.099.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.299.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the barley gene, Contig16925_at, orthologous to the query gene, ZmAffx.575.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7287.4Contig16925_atAt1g77590--2e-1At1g49790F-box family protein-relatedO.I.H.G.S.X.
0.4255.2Contig26597_atAt1g77590--9e-2At5g47330palmitoyl protein thioesterase family proteinO.I.H.G.S.X.
0.4053.1HB12N12r_s_atAt1g77590--3e+0At4g19100unknown proteinO.I.H.G.S.X.
0.3342.6Contig17597_atAt1g77590--6e+0At5g61100-O.I.H.G.S.X.
0.3342.6Contig1139_s_atAt1g77590--1e-19At3g0711060S ribosomal protein L13A (RPL13aA)O.I.H.G.S.X.
0.3138.6Contig20206_atAt1g77590--6e-3At1g73010phosphataseO.I.H.G.S.X.
0.3138.6Contig18744_atAt1g77590--2e+0At5g41630F-box family proteinO.I.H.G.S.X.
0.3037.0Contig22516_atAt1g77590--4e-1At1g51300acyl-protein thioesterase-relatedO.I.H.G.S.X.
0.2935.5Contig14264_atAt1g77590--2e+0At1g48780unknown proteinO.I.H.G.S.X.
0.2528.9Contig20533_atAt1g77590--6e+0At5g59950RNA and export factor-binding protein, putativeO.I.H.G.S.X.
0.2326.1Contig18450_atAt1g77590--4e-1At5g5667040S ribosomal protein S30 (RPS30C)O.I.H.G.S.X.
0.1919.6Contig11116_atAt1g77590--9e-1At3g12150unknown proteinO.I.H.G.S.X.
0.1514.1HVSMEg0010H15r2_atAt1g77590--3e+0At4g25630FIB2 (FIBRILLARIN 2)O.I.H.G.S.X.
0.1412.9Contig20621_atAt1g77590--2e-3At4g27320universal stress protein (USP) family proteinO.I.H.G.S.X.
0.1311.6Contig177_atAt1g77590--3e-93At5g17310UTP--glucose-1-phosphate uridylyltransferase, putative / UDP-glucose pyrophosphorylase, putative / UGPase, putativeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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