Co-expression analysis

Gene ID	ZmAffx.571.1.S1_at
Gene name	Hypothetical protein LOC100191288
Homology with Arabidopsis	Similar to At5g20230: ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN) (HF=3e+0)
Module size	14 genes
NF	0.60
%ile	80.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.99	ZmAffx.571.1.S1_at	AI714687	Hypothetical protein LOC100191288	-	3e+0	At5g20230	ATBCB (ARABIDOPSIS BLUE-COPPER-BINDING PROTEIN)	O.I.	H.G.	S.X.	Please select
0.78	92.5	1.00	Zm.53.1.S1_at	AB021176.1	root cap periphery gene2	-	2e-1	At3g19430	late embryogenesis abundant protein-related / LEA protein-related	O.I.	H.G.	S.X.	Please select
0.71	88.2	1.00	Zm.5775.1.A1_at	AI649573	-	-	1e+1	At3g06600	unknown protein	O.I.	H.G.	S.X.	Please select
0.71	88.2	1.00	Zm.16895.1.A1_at	BM075234	-	-	2e+0	At5g15100	PIN8 (PIN-FORMED 8)	O.I.	H.G.	S.X.	Please select
0.70	87.0	1.00	Zm.1039.3.S1_at	AI677375	Hypothetical protein LOC100194359	-	3e+0	At4g18580	unknown protein	O.I.	H.G.	S.X.	Please select
0.65	82.1	1.00	Zm.5495.1.S1_at	AY103870.1	-	-	1e-30	At2g44100	ATGDI1 (ARABIDOPSIS THALIANA GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1)	O.I.	H.G.	S.X.	Please select
0.61	79.5	1.00	Zm.12405.1.A1_at	BM381554	alpha/beta hydrolase fold	-	2e+0	At1g64340	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	1.00	Zm.13664.1.S1_at	BG836397	-	-	6e-17	At3g15610	transducin family protein / WD-40 repeat family protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	1.00	Zm.8632.1.A1_at	BM268513	-	-	5e+0	At3g55672	-	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	ZmAffx.1139.1.A1_at	AW331649	-	-	5e+0	At5g07370	IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA)	O.I.	H.G.	S.X.	Please select
0.47	59.9	1.00	Zm.3092.1.S1_at	AW076382	-	-	5e+0	At5g13070	MSF1-like family protein	O.I.	H.G.	S.X.	Please select
0.47	59.9	1.00	Zm.2463.2.S1_at	AW191411	hypothetical protein LOC100193981	-	3e+0	At2g14890	AGP9 (ARABINOGALACTAN PROTEIN 9)	O.I.	H.G.	S.X.	Please select
0.44	55.7	1.00	ZmAffx.104.1.A1_at	AI665536	hypothetical protein LOC100273079	-	8e-1	At2g34980	SETH1	O.I.	H.G.	S.X.	Please select
0.39	45.6	1.00	Zm.15937.1.A1_at	CO520791	-	-	5e+0	At3g25200	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.3	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.1	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.6	98.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.1	90.8	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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