Co-expression analysis

Gene ID ZmAffx.559.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g48970: mitochondrial substrate carrier family protein (HF=3e+0)
Module size 7 genes
NF 0.49
%ile 62.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5267.30.99ZmAffx.559.1.A1_atAI714543--3e+0At5g48970mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.5976.10.99ZmAffx.742.1.S1_atAI740139--3e+0At1g10650protein binding / zinc ion bindingO.I.H.G.S.X.
0.5369.10.99ZmAffx.894.1.A1_atAI770873--8e-1At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.5065.70.99ZmAffx.1194.1.A1_atBE025369--4e+0At5g59990-O.I.H.G.S.X.
0.4861.30.99Zm.14437.2.S1_atAI600681RNA binding protein-3e+0At5g66010RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.4251.30.99ZmAffx.812.1.A1_atAI770420--8e-4At1g49730protein kinase family proteinO.I.H.G.S.X.
0.3131.60.99Zm.2102.1.A1_atAW267527hypothetical protein LOC100274069-3e-3At2g32080PUR ALPHA-1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.898.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage