Co-expression analysis

Gene ID ZmAffx.544.1.A1_at
Gene name hypothetical protein LOC100277115
Homology with ArabidopsisSimilar to At1g04800: glycine-rich protein (HF=3e+0)
Module size 20 genes
NF 0.33
%ile 32.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.99ZmAffx.544.1.A1_atAI712096hypothetical protein LOC100277115-3e+0At1g04800glycine-rich proteinO.I.H.G.S.X.
0.5571.60.99Zm.13295.1.A1_atCO531194--2e+0At2g19880ceramide glucosyltransferase, putativeO.I.H.G.S.X.
0.4149.70.99Zm.4376.1.A1_atAI712238hypothetical protein LOC100275363-2e+0At2g23830vesicle-associated membrane protein, putative / VAMP, putativeO.I.H.G.S.X.
0.4149.70.99Zm.13184.1.S1_atCA409097--2e-1At2g20620unknown proteinO.I.H.G.S.X.
0.3844.20.99Zm.13754.1.S1_atAY105895.1ICE-like protease p20 domain containing protein-8e-6At2g35170MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-relatedO.I.H.G.S.X.
0.3641.30.99ZmAffx.118.1.S1_atAI665643--8e-1At5g59470PQ-loop repeat family protein / transmembrane family proteinO.I.H.G.S.X.
0.3538.90.99Zm.4402.1.A1_atAW091394hypothetical protein LOC100193028-1e-3At5g21160La domain-containing protein / proline-rich family proteinO.I.H.G.S.X.
0.3437.20.99Zm.1968.1.A1_atCF244101MGD2-1e-20At2g11810MGDCO.I.H.G.S.X.
0.3336.00.99ZmAffx.876.1.S1_atAI770791--4e-21At2g27210kelch repeat-containing serine/threonine phosphoesterase family proteinO.I.H.G.S.X.
0.3336.00.99Zm.15546.1.A1_atCD219276hypothetical protein LOC100276392-1e+0At5g01734unknown proteinO.I.H.G.S.X.
0.3336.00.99Zm.11475.1.A1_a_atBQ539206hypothetical protein LOC100273223-1e-3At2g45330emb1067 (embryo defective 1067)O.I.H.G.S.X.
0.3233.40.99ZmAffx.59.1.A1_atAI665091--1e+1At5g53960ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)O.I.H.G.S.X.
0.3029.80.99ZmAffx.973.1.A1_atAI833889--1e+1At5g24318catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compoundsO.I.H.G.S.X.
0.2928.10.99Zm.11596.1.A1_atBM379205--7e-2At2g46308unknown proteinO.I.H.G.S.X.
0.2724.60.99Zm.3959.1.A1_atAY109274.1hypothetical protein LOC100193090-4e-21At1g34020transporter-relatedO.I.H.G.S.X.
0.2622.70.99ZmAffx.563.1.A1_atAI714606--3e+0At5g67560ATARLA1D (ADP-ribosylation factor-like A1D)O.I.H.G.S.X.
0.2419.80.99Zm.4131.1.A1_atAI855072--1e+0At4g20325unknown proteinO.I.H.G.S.X.
0.2419.80.99Zm.10487.1.S1_atCF009695desiccation-associated protein-1e-1At1g12665-O.I.H.G.S.X.
0.2115.50.99ZmAffx.1036.1.A1_atAI881726--1e-1At2g43795unknown proteinO.I.H.G.S.X.
0.2014.20.99ZmAffx.855.1.S1_atAI770678--1e+1At5g23035-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.399.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.599.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.999.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.898.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.398.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.598.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM202310B73 19 day after pollination embryo tissue, biological replicate 1GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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