Co-expression analysis

Gene ID ZmAffx.542.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At3g20420: RTL2 (RNASE THREE-LIKE PROTEIN 2) (HF=3e+0)
Module size 6 genes
NF 0.14
%ile 9.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.93ZmAffx.542.1.A1_atAI712076--3e+0At3g20420RTL2 (RNASE THREE-LIKE PROTEIN 2)O.I.H.G.S.X.
0.2724.60.96Zm.5980.2.A1_a_atAI666161thioredoxin reductase 2-2e+0At5g58250unknown proteinO.I.H.G.S.X.
0.2318.60.95Zm.17147.1.A1_atAF330035.1ADP-glucose pyrophosphorylase small subunit-6e-82At5g48300ADG1 (ADP GLUCOSE PYROPHOSPHORYLASE 1)O.I.H.G.S.X.
0.115.30.96Zm.3284.2.A1_atCF631443--5e+0At5g45750AtRABA1c (Arabidopsis Rab GTPase homolog A1c)O.I.H.G.S.X.
0.072.90.96Zm.3862.1.S1_atCF674954--4e-6At3g19640magnesium transporter CorA-like family protein (MRS2-3)O.I.H.G.S.X.
0.051.90.95Zm.3866.1.S1_atCK370021D-amino acid oxidase-3e+0At1g51760IAR3 (IAA-ALANINE RESISTANT 3)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.299.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.599.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.099.2GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.599.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.399.0GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.499.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.498.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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