Co-expression analysis

Gene ID ZmAffx.537.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g47610: zinc finger (C3HC4-type RING finger) family protein (HF=3e+0)
Module size 18 genes
NF 0.62
%ile 83.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.50.99ZmAffx.537.1.A1_atAI711809--3e+0At5g47610zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.8896.70.99ZmAffx.1469.1.S1_at11990232-36--2e-38Atcg00560-O.I.H.G.S.X.
0.7992.80.99Zm.18267.1.S1_atAY222838.1--2e+0At5g59845gibberellin-regulated family proteinO.I.H.G.S.X.
0.7992.80.99Zm.1824.1.S1_atAI374511protein kinase-like-6e-2At1g01140CIPK9 (CBL-INTERACTING PROTEIN KINASE 9)O.I.H.G.S.X.
0.7792.10.99ZmAffx.1139.1.S1_atAW331649--5e+0At5g07370IPK2a (INOSITOL POLYPHOSPHATE KINASE 2 ALPHA)O.I.H.G.S.X.
0.6582.10.99ZmAffx.1340.1.S1_at11990232-88--7e-45Atcg01080-O.I.H.G.S.X.
0.6381.11.00ZmAffx.181.1.S1_atAI668330--8e-1At5g25640-O.I.H.G.S.X.
0.6077.80.99ZmAffx.1341.1.S1_at11990232-89--2e-119Atcg01090-O.I.H.G.S.X.
0.5976.11.00ZmAffx.158.1.S1_atAI668130--3e-1At2g23400dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putativeO.I.H.G.S.X.
0.5674.40.99ZmAffx.537.1.S1_atAI711809--3e+0At5g47610zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5674.40.99Zm.9743.2.A1_atBM337550--5e+0At3g14930HEME1O.I.H.G.S.X.
0.5571.60.99ZmAffx.1431.1.S1_at11990232-16--0Atcg00150-O.I.H.G.S.X.
0.5571.60.99ZmAffx.1362.1.S1_at11990232-90--1e-156Atcg01100-O.I.H.G.S.X.
0.5571.60.99ZmAffx.1334.1.S1_at11990232-82--7e-113Atcg01010-O.I.H.G.S.X.
0.5065.70.99ZmAffx.1432.1.S1_at11990232-17ATPase III subunit-1e-75Atcg00140-O.I.H.G.S.X.
0.4961.90.99ZmAffx.1433.1.S1_at11990232-18ATP synthase B chain-7e-45Atcg00130-O.I.H.G.S.X.
0.4961.90.99ZmAffx.1344.1.S1_at40794996-152--9e+0Atmg00550-O.I.H.G.S.X.
0.4352.80.99ZmAffx.180.1.A1_atAI668329--8e-1At1g17235RTFL11 (ROTUNDIFOLIA LIKE 11)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.898.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.498.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM162264Mutant 2 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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