Co-expression analysis

Gene ID ZmAffx.536.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g65430: GRF8 (GENERAL REGULATORY FACTOR 8) (HF=1e+1)
Module size 14 genes
NF 0.60
%ile 80.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5976.10.99ZmAffx.536.1.S1_atAI711796--1e+1At5g65430GRF8 (GENERAL REGULATORY FACTOR 8)O.I.H.G.S.X.
0.8194.31.00Zm.5775.1.A1_atAI649573--1e+1At3g06600unknown proteinO.I.H.G.S.X.
0.8094.01.00Zm.53.1.S1_atAB021176.1root cap periphery gene2-2e-1At3g19430late embryogenesis abundant protein-related / LEA protein-relatedO.I.H.G.S.X.
0.7590.81.00Zm.13664.1.S1_atBG836397--6e-17At3g15610transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.6986.51.00Zm.3908.1.S1_atCF036708hypothetical protein LOC100193155-2e-3At5g15750RNA-binding S4 domain-containing proteinO.I.H.G.S.X.
0.6179.51.00Zm.1039.3.S1_atAI677375Hypothetical protein LOC100194359-3e+0At4g18580unknown proteinO.I.H.G.S.X.
0.6179.51.00Zm.8632.1.A1_atBM268513--5e+0At3g55672-O.I.H.G.S.X.
0.5775.11.00ZmAffx.1052.1.S1_atAI881839KH domain containing protein-3e+0At1g75090methyladenine glycosylase family proteinO.I.H.G.S.X.
0.5571.61.00Zm.17267.1.S1_atCK368940hypothetical protein LOC100275082-5e-1At1g80920J8O.I.H.G.S.X.
0.5267.31.00Zm.16895.1.A1_atBM075234--2e+0At5g15100PIN8 (PIN-FORMED 8)O.I.H.G.S.X.
0.4455.71.00Zm.5813.1.A1_atCF056763hypothetical protein LOC100191474-8e-32At5g55310TOP1BETA (DNA TOPOISOMERASE 1 BETA)O.I.H.G.S.X.
0.4455.71.00Zm.12405.1.A1_atBM381554alpha/beta hydrolase fold-2e+0At1g64340unknown proteinO.I.H.G.S.X.
0.4352.81.00Zm.2463.2.S1_atAW191411hypothetical protein LOC100193981-3e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.
0.4048.51.00Zm.15937.1.A1_atCO520791--5e+0At3g25200unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.699.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.198.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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