Co-expression analysis

Gene ID ZmAffx.49.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g09570: - (HF=3e+0)
Module size 45 genes
NF 0.28
%ile 24.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.98100.00.93ZmAffx.49.1.A1_atAI664982--3e+0At5g09570-O.I.H.G.S.X.
0.6077.80.96Zm.16476.1.A1_atCO527154lipid binding protein-2e+1At5g15600SP1L4 (SPIRAL1-LIKE4)O.I.H.G.S.X.
0.5674.40.96Zm.2308.1.A1_atBG841336hypothetical protein LOC100276079-2e-2At5g66005Expressed proteinO.I.H.G.S.X.
0.5267.30.95Zm.5083.1.A1_a_atAY103727.1--3e-22At5g22060ATJ2O.I.H.G.S.X.
0.4759.90.93ZmAffx.601.1.S1_atAI715029--8e-1At1g35430unknown proteinO.I.H.G.S.X.
0.4658.40.96Zm.9768.1.A1_atBM338514hypothetical protein LOC100273687-3e-2At1g29730ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinaseO.I.H.G.S.X.
0.4251.30.94Zm.13769.1.S1_atAY105621.1--2e-1At2g21820unknown proteinO.I.H.G.S.X.
0.4048.50.95ZmAffx.106.1.A1_atAI665540--3e+0At4g14060major latex protein-related / MLP-relatedO.I.H.G.S.X.
0.4048.50.96Zm.17839.1.S1_atU12679.1glutathione S-transferase2-1e-1At4g02520ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)O.I.H.G.S.X.
0.3945.60.96Zm.5753.1.A1_atAW066540smr domain containing protein-7e-1At1g50390fructokinase-relatedO.I.H.G.S.X.
0.3844.20.96Zm.11667.1.A1_atCF633574hypothetical protein LOC100274234-4e-1At4g39630unknown proteinO.I.H.G.S.X.
0.3641.30.94Zm.10095.1.A1_atCF633991chloroplast small heat shock protein-2e+0At3g57062unknown proteinO.I.H.G.S.X.
0.3641.30.96Zm.3558.1.A1_atCA402352--3e+0At1g68620hydrolaseO.I.H.G.S.X.
0.3538.90.95Zm.4036.1.A1_atCD994340tyrosine specific protein phosphatase family protein-1e-11At1g05000tyrosine specific protein phosphatase family proteinO.I.H.G.S.X.
0.3538.90.96Zm.18122.1.S1_atCN844577hypothetical protein LOC100278956-5e+0At5g44540tapetum-specific protein-relatedO.I.H.G.S.X.
0.3538.90.96Zm.19237.1.A1_atCA402877hypothetical protein LOC100216898-2e-1At3g49010ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1)O.I.H.G.S.X.
0.3538.90.96Zm.2867.1.A1_atAY107561.1--8e-2At1g28190unknown proteinO.I.H.G.S.X.
0.3437.20.95ZmAffx.1046.1.S1_atAI881792--8e-1At1g79160unknown proteinO.I.H.G.S.X.
0.3336.00.96Zm.17251.1.A1_atBM336955--5e+0At1g43130LCV2 (LIKE COV 2)O.I.H.G.S.X.
0.3131.60.96Zm.2869.1.A1_atCK144500asparagine synthetase 2-9e-15At3g47340ASN1 (GLUTAMINE-DEPENDENT ASPARAGINE SYNTHASE 1)O.I.H.G.S.X.
0.3029.80.95Zm.11327.1.S1_atBM348920--1e+0At5g18404unknown proteinO.I.H.G.S.X.
0.3029.80.96Zm.16687.1.S1_atCF636696hypothetical protein LOC100194066-3e-3At5g07250ATRBL3 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 3)O.I.H.G.S.X.
0.2928.10.93Zm.10304.1.S1_atBM895485--6e+0At3g46660UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12)O.I.H.G.S.X.
0.2828.10.96Zm.10219.2.S1_a_atM95067.1hypothetical LOC542286-1e-7At1g25220ASB1 (ANTHRANILATE SYNTHASE BETA SUBUNIT 1)O.I.H.G.S.X.
0.2724.60.96Zm.2699.1.A1_atAW066891hypothetical protein LOC100193918-1e+1At5g16170unknown proteinO.I.H.G.S.X.
0.2724.60.97Zm.10123.1.S1_atBM380717heat- and acid-stable phosphoprotein-3e-14At5g46020unknown proteinO.I.H.G.S.X.
0.2724.60.96Zm.12431.1.S1_atAY106853.1hypothetical protein LOC100217105-4e+0At4g18400unknown proteinO.I.H.G.S.X.
0.2622.70.95Zm.17741.1.S1_atCK370742--4e+0At5g21430DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.2622.70.96Zm.2355.1.A1_atCF043465--9e+0At3g24770CLE41 (CLAVATA3/ESR-RELATED 41)O.I.H.G.S.X.
0.2419.80.97Zm.9194.1.A1_atBM267243--1e+0At3g03456unknown proteinO.I.H.G.S.X.
0.2419.80.97Zm.522.1.S1_atAF200531.1cellulose synthase7-1e-38At2g21770CESA9 (CELLULOSE SYNTHASE A9)O.I.H.G.S.X.
0.2216.90.96Zm.16630.1.A1_atCF646437--1e+1At5g60580zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2115.50.97Zm.19158.2.S1_atBM073998thioredoxin F-type-3e-11At5g16400ATF2O.I.H.G.S.X.
0.1912.80.97Zm.2602.1.S1_atAY109922.1hypothetical protein LOC100217277-1e-2At5g243403'-5' exonuclease domain-containing proteinO.I.H.G.S.X.
0.1811.60.96Zm.12322.1.A1_atCD956182UDP-glucuronic acid 4-epimerase-1e+0At4g30440GAE1 (UDP-D-GLUCURONATE 4-EPIMERASE 1)O.I.H.G.S.X.
0.1811.60.98Zm.13202.1.A1_atCA403491hypothetical protein LOC100273129-1e-8At1g56590clathrin adaptor complexes medium subunit family proteinO.I.H.G.S.X.
0.169.40.96Zm.8261.1.A1_atBE050536BCL-2 binding anthanogene-1-2e+0At5g12840NF-YA1 (NUCLEAR FACTOR Y, SUBUNIT A1)O.I.H.G.S.X.
0.169.40.97Zm.4340.1.A1_atM76685.1orange pericarp2-2e-29At4g27070TSB2 (TRYPTOPHAN SYNTHASE BETA-SUBUNIT 2)O.I.H.G.S.X.
0.169.40.96Zm.2678.1.A1_atBM339111hypothetical protein LOC100193236-2e-1At1g05180AXR1 (AUXIN RESISTANT 1)O.I.H.G.S.X.
0.169.40.95Zm.5662.1.A1_atAY109367.1--2e+0At1g67148unknown proteinO.I.H.G.S.X.
0.158.60.95Zm.18081.1.S1_atBM268388chorismate synthase 2-1e-7At1g48850EMB1144 (embryo defective 1144)O.I.H.G.S.X.
0.158.60.96Zm.2976.1.S1_atAF045033.1nitrate-induced NOI protein-2e-3At2g04410-O.I.H.G.S.X.
0.158.60.96ZmAffx.1032.1.S1_atAI881679--3e+0At2g40650pre-mRNA splicing factor PRP38 family proteinO.I.H.G.S.X.
0.147.70.96Zm.13542.1.S1_atAY108280.1Transcription factor MYB31-4e-24At4g38620MYB4O.I.H.G.S.X.
0.125.90.95Zm.4433.1.A1_atAY108076.1--4e-2At3g09850D111/G-patch domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.699.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
22.199.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.799.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.799.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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