Co-expression analysis

Gene ID ZmAffx.482.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g57510: unknown protein (HF=3e+0)
Module size 8 genes
NF 0.12
%ile 7.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9399.30.99ZmAffx.482.1.A1_atAI691285--3e+0At5g57510unknown proteinO.I.H.G.S.X.
0.2419.80.99Zm.4852.1.A1_atCO527893hypothetical protein LOC100192969-3e-2At4g39000AtGH9B17 (Arabidopsis thaliana glycosyl hydrolase 9B17)O.I.H.G.S.X.
0.158.60.99Zm.16459.1.S1_atAY111971.1--5e+0At5g01075beta-galactosidaseO.I.H.G.S.X.
0.158.60.99Zm.6234.2.S1_atAI881460--8e-7At2g30110ATUBA1O.I.H.G.S.X.
0.125.90.99ZmAffx.1173.1.S1_atAW787668--3e+0At3g47800aldose 1-epimerase family proteinO.I.H.G.S.X.
0.083.40.99Zm.2556.1.A1_atBM075217hypothetical protein LOC100194091-4e-1At5g09530hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.072.90.99ZmAffx.976.1.A1_atAI833931--1e-2At4g23880unknown proteinO.I.H.G.S.X.
0.041.50.99ZmAffx.282.1.S1_atAI670410--3e+0At5g09520hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.498.5GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.498.5GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.298.5GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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