Co-expression analysis

Gene ID ZmAffx.475.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g74210: glycerophosphoryl diester phosphodiesterase family protein (HF=2e-1)
Module size 37 genes
NF 0.45
%ile 54.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8896.70.99ZmAffx.475.1.A1_atAI677510--2e-1At1g74210glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.6179.50.99Zm.13616.1.S1_atAY107497.1--2e+0At4g25315Expressed proteinO.I.H.G.S.X.
0.5875.10.99ZmAffx.976.1.A1_atAI833931--1e-2At4g23880unknown proteinO.I.H.G.S.X.
0.5571.60.99Zm.13940.1.S1_atAI677337hypothetical protein LOC100193246-1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.5571.60.99Zm.6275.1.S1_a_atAF540907.1benzoxazin6-7e-1At1g066402-oxoglutarate-dependent dioxygenase, putativeO.I.H.G.S.X.
0.5469.80.99Zm.361.1.A1_atAB060130.1response regulator 8-5e-3At3g16857ARR1 (ARABIDOPSIS RESPONSE REGULATOR 1)O.I.H.G.S.X.
0.5469.80.99Zm.15242.1.A1_atBM340075--1e+1At3g16712unknown proteinO.I.H.G.S.X.
0.5469.80.99ZmAffx.89.1.A1_atAI665353hypothetical protein LOC100277768-1e+1At5g20560beta-1,3-glucanase, putativeO.I.H.G.S.X.
0.5469.80.99Zm.13228.1.S1_atCA452580LHT1-5e+0At4g17585unknown proteinO.I.H.G.S.X.
0.5369.10.99ZmAffx.193.1.S1_atAI668444Respiratory burst oxidase-like protein C-3e+0At2g05915unknown proteinO.I.H.G.S.X.
0.5267.30.99Zm.18157.1.A1_atCO533028--2e-1At4g20290unknown proteinO.I.H.G.S.X.
0.5166.40.99Zm.4326.1.A1_atAI711615hypothetical protein AY106635-5e+0At5g15120unknown proteinO.I.H.G.S.X.
0.5065.70.99Zm.5028.1.S1_atAY103976.1splicing factor, arginine/serine-rich 12-1e+0At4g23770unknown proteinO.I.H.G.S.X.
0.5065.71.00ZmAffx.105.1.S1_atAI665537--3e+0At4g20000VQ motif-containing proteinO.I.H.G.S.X.
0.4961.90.99Zm.6650.1.A1_atBM336595fiber protein Fb2-3e+0At5g35695unknown proteinO.I.H.G.S.X.
0.4861.30.99Zm.13588.1.A1_atAY107800.1--1e+0At4g3467040S ribosomal protein S3A (RPS3aB)O.I.H.G.S.X.
0.4759.91.00Zm.4171.1.A1_atBG841769isoamyl acetate-hydrolyzing esterase-3e+0At1g691902-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase/ dihydropteroate synthaseO.I.H.G.S.X.
0.4658.40.99Zm.13728.1.S1_atAF332172.1alpha-expansin 4-2e-19At3g55500ATEXPA16 (ARABIDOPSIS THALIANA EXPANSIN A16)O.I.H.G.S.X.
0.4455.70.99Zm.3610.1.A1_atAW065778hypothetical protein LOC100276901-2e+0At4g04360unknown proteinO.I.H.G.S.X.
0.4455.70.99Zm.11787.1.A1_a_atBM380772--6e+0At5g17523-O.I.H.G.S.X.
0.4455.70.99Zm.2864.1.S1_atCA828566nucleotide-binding protein 1-4e-33At5g50960NBP35 (NUCLEOTIDE BINDING PROTEIN 35)O.I.H.G.S.X.
0.4352.80.99Zm.12184.1.A1_atBM380021--6e-10At4g11960PGRL1B (PGR5-Like B)O.I.H.G.S.X.
0.4352.80.99ZmAffx.781.1.A1_atAI746268--1e+1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)O.I.H.G.S.X.
0.4352.80.99Zm.434.1.A1_atAF069909.1pyruvate dehydrogenase E1 beta subunit isoform 2-7e-23At5g50850MAB1 (MACCI-BOU)O.I.H.G.S.X.
0.4251.30.99Zm.2614.2.A1_atCD436098--4e-1At4g31780MGD1 (MONOGALACTOSYL DIACYLGLYCEROL SYNTHASE 1)O.I.H.G.S.X.
0.4251.30.99Zm.7054.1.S1_atBM331766actin-depolymerizing factor 6-6e-4At5g59890ADF4 (ACTIN DEPOLYMERIZING FACTOR 4)O.I.H.G.S.X.
0.4251.30.99Zm.1341.1.A1_atBF729181PAP fibrillin family protein-4e+0At4g35390AGF1 (AT-hook protein of GA feedback 1)O.I.H.G.S.X.
0.4251.30.99ZmAffx.982.4.S1_atAW787457--3e+0At4g17615CBL1 (CALCINEURIN B-LIKE PROTEIN 1)O.I.H.G.S.X.
0.3945.60.99Zm.3851.4.A1_atCD441077--1e+0At5g12470unknown proteinO.I.H.G.S.X.
0.3844.20.99Zm.6119.1.A1_atAY105312.1--4e-3At2g28380DRB2 (DSRNA-BINDING PROTEIN 2)O.I.H.G.S.X.
0.3336.00.99--O.I.H.G.S.X.
0.3233.40.99ZmAffx.85.1.A1_atAI665306alpha-6-galactosyltransferase-8e-1At2g22900galactosyl transferase GMA12/MNN10 family proteinO.I.H.G.S.X.
0.3233.40.99ZmAffx.901.1.A1_atAI770894--1e+1At5g47455unknown proteinO.I.H.G.S.X.
0.3029.80.99Zm.18392.1.A1_atCO533252--7e+0At2g27130protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.3029.80.99Zm.3169.5.S1_x_atAI739763minichromosome maintenance protein-1e-1At5g44635minichromosome maintenance family protein / MCM family proteinO.I.H.G.S.X.
0.2828.10.99ZmAffx.87.1.A1_atAI665344--1e+1At5g39330unknown proteinO.I.H.G.S.X.
0.2622.70.99ZmAffx.900.1.A1_atAI770893--1e+1At5g19480unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.498.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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