Co-expression analysis

Gene ID ZmAffx.463.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g33450: MYB69 (MYB DOMAIN PROTEIN 69) (HF=3e+0)
Module size 19 genes
NF 0.35
%ile 36.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.97ZmAffx.463.1.A1_atAI677335--3e+0At4g33450MYB69 (MYB DOMAIN PROTEIN 69)O.I.H.G.S.X.
0.5369.10.99ZmAffx.742.1.S1_atAI740139--3e+0At1g10650protein binding / zinc ion bindingO.I.H.G.S.X.
0.4759.90.99ZmAffx.894.1.A1_atAI770873--8e-1At5g6230040S ribosomal protein S20 (RPS20C)O.I.H.G.S.X.
0.4455.70.99ZmAffx.812.1.A1_atAI770420--8e-4At1g49730protein kinase family proteinO.I.H.G.S.X.
0.4455.70.99ZmAffx.559.1.A1_atAI714543--3e+0At5g48970mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.4352.80.99Zm.14437.2.S1_atAI600681RNA binding protein-3e+0At5g66010RNA binding / nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.4048.50.98Zm.17689.1.S1_atCK370194--3e+0At1g63055unknown proteinO.I.H.G.S.X.
0.4048.50.99ZmAffx.477.1.A1_atAI677582--8e-1At5g51860MADS-box protein (AGL72)O.I.H.G.S.X.
0.3844.20.98Zm.523.1.S1_atAF200533.1cellulose synthase-9-3e-67At5g05170CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1)O.I.H.G.S.X.
0.3844.20.99ZmAffx.1194.1.A1_atBE025369--4e+0At5g59990-O.I.H.G.S.X.
0.3233.40.99ZmAffx.587.1.A1_atAI715015--3e+0At5g35900LBD35 (LOB DOMAIN-CONTAINING PROTEIN 35)O.I.H.G.S.X.
0.3233.40.99Zm.2102.1.A1_atAW267527hypothetical protein LOC100274069-3e-3At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.3029.80.99ZmAffx.743.1.S1_atAI745735--8e-1At4g28170unknown proteinO.I.H.G.S.X.
0.2828.10.99ZmAffx.20.1.S1_atAI600385--3e+0At4g02550unknown proteinO.I.H.G.S.X.
0.2216.90.99Zm.3180.1.A1_atAW179477--7e-1At1g32700zinc-binding family proteinO.I.H.G.S.X.
0.2014.20.99ZmAffx.750.1.A1_atAI677184hypothetical protein LOC100275058-9e-1At5g1620050S ribosomal protein-relatedO.I.H.G.S.X.
0.1912.80.98Zm.1128.1.S1_atBM736430--3e+0At1g27130ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13)O.I.H.G.S.X.
0.1811.60.99Zm.6284.1.S1_atAI691250hypothetical protein LOC100194329-1e+0At5g22035-O.I.H.G.S.X.
0.158.60.98Zm.18524.1.A1_atCO533378hypothetical protein LOC100217281-3e-1At5g17110-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.799.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.599.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.499.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.299.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.999.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.098.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.898.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.898.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



Back to the CoP portal site

Back to the KAGIANA project homepage