Co-expression analysis

Gene ID ZmAffx.45.1.A1_at
Gene name amino acid permease
Homology with ArabidopsisSimilar to At5g52160: protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (HF=8e-1)
Module size 11 genes
NF 0.19
%ile 13.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7490.30.85ZmAffx.45.1.A1_atAI664925amino acid permease-8e-1At5g52160protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.5369.10.89ZmAffx.241.1.S1_atAI670253--3e+0At1g75190unknown proteinO.I.H.G.S.X.
0.4861.30.86Zm.2468.1.S1_atAW120207hypothetical protein LOC100191330-2e+0At4g39190unknown proteinO.I.H.G.S.X.
0.4455.70.89Zm.872.1.A1_atBG320194--3e-23At1g77610glucose-6-phosphate/phosphate translocator-relatedO.I.H.G.S.X.
0.2928.10.90ZmAffx.370.1.A1_atAI673868--3e+0At2g42610LSH10 (LIGHT SENSITIVE HYPOCOTYLS 10)O.I.H.G.S.X.
0.2014.20.89Zm.889.2.S1_atCD439290--4e-20At4g38740ROC1 (ROTAMASE CYP 1)O.I.H.G.S.X.
0.1710.60.89ZmAffx.37.1.S1_atAI657467--5e+0At3g21338unknown proteinO.I.H.G.S.X.
0.1710.60.91ZmAffx.353.1.S1_atAI670540--6e+0Atcg01080-O.I.H.G.S.X.
0.158.60.89ZmAffx.622.1.S1_atAI715050--1e+1At2g44370DC1 domain-containing proteinO.I.H.G.S.X.
0.147.70.91Zm.9142.1.A1_atBM341036--4e-1At3g23170unknown proteinO.I.H.G.S.X.
0.062.30.87Zm.13447.1.S1_atCK786856chaperone protein dnaJ 10-2e-11At1g21080DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.599.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.298.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.098.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.298.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.398.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.198.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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