Co-expression analysis

Gene ID	ZmAffx.406.9.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g16580: BGLU2 (BETA GLUCOSIDASE 2) (HF=1e+1)
Module size	12 genes
NF	0.42
%ile	49.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.79	92.8	0.99	ZmAffx.406.9.A1_at	AI670512	-	-	1e+1	At5g16580	BGLU2 (BETA GLUCOSIDASE 2)	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	Zm.15776.1.S1_at	BE639950	-	-	6e+0	At5g46025	Ras-related GTP-binding family protein	O.I.	H.G.	S.X.	Please select
0.48	61.3	1.00	Zm.17332.1.A1_at	CK369960	-	-	4e+0	At2g29590	thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	1.00	Zm.17267.1.S1_at	CK368940	hypothetical protein LOC100275082	-	5e-1	At1g80920	J8	O.I.	H.G.	S.X.	Please select
0.42	51.3	1.00	ZmAffx.900.1.A1_at	AI770893	-	-	1e+1	At5g19480	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	1.00	Zm.9508.1.A1_at	BM351117	-	-	9e-3	At5g28040	transcription regulator	O.I.	H.G.	S.X.	Please select
0.39	45.6	1.00	Zm.2321.6.S1_at	BI675076	-	-	3e-3	At3g28970	AAR3 (antiauxin-resistant 3)	O.I.	H.G.	S.X.	Please select
0.39	45.6	1.00	Zm.9517.1.A1_at	BM269495	-	-	2e+1	Atmg00630	-	O.I.	H.G.	S.X.	Please select
0.37	42.3	0.99	Zm.14590.1.A1_x_at	AY110683.1	-	-	3e-2	At5g50100	-	O.I.	H.G.	S.X.	Please select
0.33	36.0	1.00	ZmAffx.1052.1.S1_at	AI881839	KH domain containing protein	-	3e+0	At1g75090	methyladenine glycosylase family protein	O.I.	H.G.	S.X.	Please select
0.32	33.4	1.00	Zm.2146.1.A1_at	AW287813	-	-	5e+0	At5g35475	-	O.I.	H.G.	S.X.	Please select
0.32	33.4	1.00	ZmAffx.889.1.S1_at	AI770841	pre-mRNA processing factor	-	8e-7	At2g40650	pre-mRNA splicing factor PRP38 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
21.8	99.4	GSM320468	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.3	99.0	GSM320471	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.8	99.0	GSM320467	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.5	98.8	GSM320472	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320466	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320465	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320473	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320470	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320469	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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