Co-expression analysis

Gene ID ZmAffx.406.9.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g16580: BGLU2 (BETA GLUCOSIDASE 2) (HF=1e+1)
Module size 12 genes
NF 0.42
%ile 49.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7992.80.99ZmAffx.406.9.A1_atAI670512--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)O.I.H.G.S.X.
0.5065.71.00Zm.15776.1.S1_atBE639950--6e+0At5g46025Ras-related GTP-binding family proteinO.I.H.G.S.X.
0.4861.31.00Zm.17332.1.A1_atCK369960--4e+0At2g29590thioesterase family proteinO.I.H.G.S.X.
0.4352.81.00Zm.17267.1.S1_atCK368940hypothetical protein LOC100275082-5e-1At1g80920J8O.I.H.G.S.X.
0.4251.31.00ZmAffx.900.1.A1_atAI770893--1e+1At5g19480unknown proteinO.I.H.G.S.X.
0.4048.51.00Zm.9508.1.A1_atBM351117--9e-3At5g28040transcription regulatorO.I.H.G.S.X.
0.3945.61.00Zm.2321.6.S1_atBI675076--3e-3At3g28970AAR3 (antiauxin-resistant 3)O.I.H.G.S.X.
0.3945.61.00Zm.9517.1.A1_atBM269495--2e+1Atmg00630-O.I.H.G.S.X.
0.3742.30.99Zm.14590.1.A1_x_atAY110683.1--3e-2At5g50100-O.I.H.G.S.X.
0.3336.01.00ZmAffx.1052.1.S1_atAI881839KH domain containing protein-3e+0At1g75090methyladenine glycosylase family proteinO.I.H.G.S.X.
0.3233.41.00Zm.2146.1.A1_atAW287813--5e+0At5g35475-O.I.H.G.S.X.
0.3233.41.00ZmAffx.889.1.S1_atAI770841pre-mRNA processing factor-8e-7At2g40650pre-mRNA splicing factor PRP38 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
21.899.4GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.399.0GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.899.0GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.598.8GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.098.7GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320473protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320470protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM320469protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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