Co-expression analysis

Gene ID ZmAffx.397.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g63870: PP7 (SERINE/THREONINE PHOSPHATASE 7) (HF=3e+0)
Module size 6 genes
NF 0.74
%ile 94.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.97ZmAffx.397.1.S1_atAI676825--3e+0At5g63870PP7 (SERINE/THREONINE PHOSPHATASE 7)O.I.H.G.S.X.
0.8094.00.97Zm.5800.1.S1_atCK394709fiber protein Fb11-1e+0At3g09770zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.7389.90.97Zm.5240.1.S1_a_atCF637178hypothetical protein LOC100272335-1e-70At5g2244060S ribosomal protein L10A (RPL10aC)O.I.H.G.S.X.
0.6179.50.97Zm.6564.1.A1_atAW231699hypothetical protein LOC100272535-2e+0At4g34850chalcone and stilbene synthase family proteinO.I.H.G.S.X.
0.4455.70.97Zm.1373.1.A1_atCF623658wound/stress protein-9e+0At5g37800basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.4455.70.97Zm.6904.1.S1_atAY106446.1hypothetical protein LOC100273500-6e-24At5g37020ARF8 (AUXIN RESPONSE FACTOR 8)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.998.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320466protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.897.9GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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