Co-expression analysis

Gene ID ZmAffx.38.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g04423: endo-1,3(4)-beta-glucanase (HF=2e+0)
Module size 11 genes
NF 0.21
%ile 16.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.92ZmAffx.38.1.A1_atAI657470--2e+0At4g04423endo-1,3(4)-beta-glucanaseO.I.H.G.S.X.
0.3742.30.94ZmAffx.1137.1.A1_atAW331515--3e+1At5g63000unknown proteinO.I.H.G.S.X.
0.3233.40.96ZmAffx.1009.1.A1_atAI881408--2e+0At5g47320RPS19 (RIBOSOMAL PROTEIN S19)O.I.H.G.S.X.
0.3029.80.96Zm.9319.1.A1_atCF627080hypothetical protein LOC100216855-2e+0At5g10000ATFD4 (ferredoxin 4)O.I.H.G.S.X.
0.2724.60.96ZmAffx.1084.1.S1_atAI987532--4e+0At1g31760SWIB complex BAF60b domain-containing proteinO.I.H.G.S.X.
0.2419.80.96Zm.8563.1.A1_atBM336306hypothetical protein LOC100193983-9e-15At1g23110unknown proteinO.I.H.G.S.X.
0.2318.60.96Zm.15903.1.S1_atL77912.1phenylalanine ammonia-lyase-2e-14At3g10340PAL4 (Phenylalanine ammonia-lyase 4)O.I.H.G.S.X.
0.169.40.94Zm.19056.1.A1_atCD972621AT-hook protein 1-8e-4At2g33620DNA-binding family protein / AT-hook protein 1 (AHP1)O.I.H.G.S.X.
0.125.90.95Zm.14591.3.S1_a_atCK370424triosephosphate isomerase, cytosolic-3e-7At3g55440TPI (TRIOSEPHOSPHATE ISOMERASE)O.I.H.G.S.X.
0.104.60.96Zm.386.1.S1_atL20621.1tassel seed2-4e-2At3g13850LBD22 (LOB DOMAIN-CONTAINING PROTEIN 22)O.I.H.G.S.X.
0.083.40.94Zm.8233.1.S1_a_atAY103797.1--6e-14At2g24590splicing factor, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.898.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.798.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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