Co-expression analysis

Gene ID ZmAffx.377.1.A1_at
Gene name Hypothetical protein LOC100191455
Homology with ArabidopsisSimilar to At1g49960: xanthine/uracil permease family protein (HF=2e-1)
Module size 12 genes
NF 0.08
%ile 4.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3945.60.86ZmAffx.377.1.A1_atAI673932Hypothetical protein LOC100191455-2e-1At1g49960xanthine/uracil permease family proteinO.I.H.G.S.X.
0.2014.20.90RPTR-Zm-NC_002086-1_atRPTR-Zm-NC_002086-1---O.I.H.G.S.X.
0.158.60.92Zm.18039.1.A1_atCK985952hypothetical protein LOC100191748-1e+0At5g2806040S ribosomal protein S24 (RPS24B)O.I.H.G.S.X.
0.147.70.92Zm.10012.1.S1_atCF635852--1e+0At4g13140-O.I.H.G.S.X.
0.125.90.92Zm.914.1.S1_atCK368496B12D protein-4e-4At3g48140senescence-associated protein, putativeO.I.H.G.S.X.
0.115.30.91ZmAffx.64.1.A1_atAI66512226S proteasome non-ATPase regulatory subunit 14-4e-12At4g1500060S ribosomal protein L27 (RPL27C)O.I.H.G.S.X.
0.094.00.91Zm.10018.1.A1_atCA400428expressed protein DH12-1e+0At3g10580myb family transcription factorO.I.H.G.S.X.
0.072.90.94Zm.8565.1.S1_atCO528893hypothetical protein LOC100279882-8e-7At2g01110APG2 (ALBINO AND PALE GREEN 2)O.I.H.G.S.X.
0.072.90.93ZmAffx.54.1.S1_atAI665038--5e-2At3g20610non-race specific disease resistance protein, putativeO.I.H.G.S.X.
0.062.30.92ZmAffx.713.1.A1_atAI737188--8e-1At2g37140terpene synthase/cyclase-relatedO.I.H.G.S.X.
0.041.50.94Zm.9767.1.A1_atBM340742--3e-1At1g77122unknown proteinO.I.H.G.S.X.
0.031.10.89Zm.9778.1.A1_atBM338606outer envelope protein-3e-3At2g43950OEP37O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.496.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.294.5GSM258174B84 11-day seedling aerial tissue biological replicate 1GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosisLink to GEO
3.194.3GSM258192B84 11-day seedling aerial tissue biological replicate 3GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosisLink to GEO
2.692.9GSM258183B84 11-day seedling aerial tissue biological replicate 2GSE10236Similar patterns of additive and non-additive gene expression in maize hybrids with varying levels of heterosisLink to GEO
2.391.7GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.291.3GSM162267Mutant 1 with array type maize from AffymetrixGSE7030Phenotypic and molecular characterisation of a novel Bt2 allele in maizeLink to GEO
2.190.8GSM206329Right pulvinus control polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
2.190.8GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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