Co-expression analysis

Gene ID ZmAffx.365.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g39580: peroxidase, putative (HF=1e+1)
Module size 10 genes
NF 0.16
%ile 10.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6279.80.98ZmAffx.365.1.A1_atAI673842--1e+1At5g39580peroxidase, putativeO.I.H.G.S.X.
0.4352.80.98Zm.7367.1.A1_atBM078099--5e+0At4g33730pathogenesis-related protein, putativeO.I.H.G.S.X.
0.2318.60.99Zm.14476.2.S1_atCF623745protein disulfide isomerase-1e-5At3g54960ATPDIL1-3 (PDI-LIKE 1-3)O.I.H.G.S.X.
0.2216.90.99Zm.10700.1.S1_atCF019059hypothetical protein LOC100276306-5e+0At5g42635glycine-rich proteinO.I.H.G.S.X.
0.1811.60.99Zm.11289.1.A1_atAY107035.1--2e-3At5g55470ATNHX3O.I.H.G.S.X.
0.1811.60.99ZmAffx.896.1.A1_atAI770881--3e+0At5g57620MYB36 (myb domain protein 36)O.I.H.G.S.X.
0.125.90.98Zm.3083.1.A1_atAW091304--3e-2At5g08150unknown proteinO.I.H.G.S.X.
0.115.30.99Zm.10078.1.A1_atAY105378.1--9e-2At3g58350meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.083.40.99ZmAffx.1400.1.S1_at40794996-75--3e+0At4g05631unknown proteinO.I.H.G.S.X.
0.083.40.98ZmAffx.181.1.A1_atAI668330--8e-1At5g25640-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.399.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.199.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.799.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.599.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.494.9GSM320443protocol: mRNA - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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