Co-expression analysis

Gene ID	ZmAffx.282.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g09520: hydroxyproline-rich glycoprotein family protein (HF=3e+0)
Module size	6 genes
NF	0.30
%ile	27.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.99	ZmAffx.282.1.S1_at	AI670410	-	-	3e+0	At5g09520	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.99	ZmAffx.732.1.S1_at	AI740043	-	-	5e+0	At3g16640	TCTP (TRANSLATIONALLY CONTROLLED TUMOR PROTEIN)	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.99	ZmAffx.751.1.A1_at	AI745874	-	-	1e+1	At5g44990	-	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.99	Zm.1094.1.A1_at	BM339500	-	-	2e-5	At5g26210	AL4 (ALFIN-LIKE 4)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.99	ZmAffx.1081.1.S1_at	AI948368	-	-	1e+1	At5g23950	C2 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.99	Zm.3610.1.A1_at	AW065778	hypothetical protein LOC100276901	-	2e+0	At4g04360	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.0	99.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.7	99.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.3	98.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.2	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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