Co-expression analysis

Gene ID	ZmAffx.278.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g73875: endonuclease/exonuclease/phosphatase family protein (HF=8e-1)
Module size	11 genes
NF	0.30
%ile	28.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.63	81.1	0.90	ZmAffx.278.1.A1_at	AI670406	-	-	8e-1	At1g73875	endonuclease/exonuclease/phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.48	61.3	0.91	ZmAffx.960.1.A1_at	AI833639	hypothetical protein LOC100273178	-	3e+0	At2g19640	ASHR2 (ASH1-RELATED PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.94	ZmAffx.96.1.S1_at	AI665410	-	-	1e+1	At4g39130	dehydrin family protein	O.I.	H.G.	S.X.	Please select
0.44	55.7	0.95	ZmAffx.195.1.S1_at	AI668458	-	-	1e+1	At5g21005	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.93	ZmAffx.33.1.A1_at	AI657429	t-snare	-	2e-1	At4g00890	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.95	Zm.622.1.S1_at	AF342809.1	tonoplast membrane integral protein ZmTIP3-2	-	4e-2	At2g01340	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.95	ZmAffx.715.1.A1_s_at	AI739762	-	-	2e-1	At1g04670	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.94	Zm.16180.1.A1_at	AW091200	-	-	5e-2	At2g28440	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	ZmAffx.937.1.S1_at	AI820257	-	-	8e+0	At4g19620	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.91	Zm.914.1.S1_at	CK368496	B12D protein	-	4e-4	At3g48140	senescence-associated protein, putative	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.95	Zm.10401.1.S1_at	CO524902	glyoxylate reductase	-	3e-12	At1g79870	oxidoreductase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.1	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320471	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.3	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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