Co-expression analysis

Gene ID	ZmAffx.269.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g09750: HEC3 (HECATE 3) (HF=3e+0)
Module size	14 genes
NF	0.56
%ile	74.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.69	86.5	0.88	ZmAffx.269.1.A1_at	AI670397	-	-	3e+0	At5g09750	HEC3 (HECATE 3)	O.I.	H.G.	S.X.	Please select
0.74	90.3	0.91	Zm.762.1.A1_a_at	BG349623	-	-	1e-4	At3g05740	RECQI1 (Arabidopsis RecQ helicase l1)	O.I.	H.G.	S.X.	Please select
0.74	90.3	0.94	RPTR-Zm-ECOLOXL_at	RPTR-Zm-ECOLOXL	-	-			-	O.I.	H.G.	S.X.	Please select
0.69	86.5	0.93	RPTR-Zm-ECOLOXB_x_at	RPTR-Zm-ECOLOXB	-	-			-	O.I.	H.G.	S.X.	Please select
0.62	79.8	0.94	RPTR-Zm-J01347-3_at	RPTR-Zm-J01347-3	-	-			-	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.91	RPTR-Zm-J01347-1_at	RPTR-Zm-J01347-1	-	-			-	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.97	RPTR-Zm-J01347-2_at	RPTR-Zm-J01347-2	-	-			-	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.97	RPTR-Zm-J01347-1_s_at	RPTR-Zm-J01347-1	-	-			-	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.98	RPTR-Zm-ECOLOXL_x_at	RPTR-Zm-ECOLOXL	-	-			-	O.I.	H.G.	S.X.	Please select
0.56	74.4	0.90	ZmAffx.622.1.S1_at	AI715050	-	-	1e+1	At2g44370	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.49	61.9	0.92	Zm.11965.1.A1_at	BM382230	hypothetical protein LOC100275559	-	2e+0	At1g06070	bZIP transcription factor, putative (bZIP69)	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.93	ZmAffx.675.1.A1_at	AI734494	-	-	3e+0	At4g24700	unknown protein	O.I.	H.G.	S.X.	Please select
0.41	49.7	0.94	Zm.610.1.A1_at	AF326498.1	small basic membrane intrinsic protein1b	-	1e-1	At4g16360	AMP-activated protein kinase	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.93	Zm.14226.1.A1_at	BM337251	hypothetical protein LOC100273457	-	3e-2	At3g20100	CYP705A19	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.2	98.8	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.4	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.0	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.0	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.6	98.6	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.8	98.1	GSM320465	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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