Co-expression analysis

Gene ID ZmAffx.241.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g75190: unknown protein (HF=3e+0)
Module size 7 genes
NF 0.34
%ile 34.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5976.10.99ZmAffx.241.1.A1_atAI670253--3e+0At1g75190unknown proteinO.I.H.G.S.X.
0.7792.10.99Zm.3288.1.A1_atCK347415immediate-early protein RSP40-2e-2At3g09032unknown proteinO.I.H.G.S.X.
0.4455.70.99Zm.7540.1.S1_atCF055286hypothetical protein LOC100192075-1e-5At4g29130HXK1 (HEXOKINASE 1)O.I.H.G.S.X.
0.4455.70.99ZmAffx.898.1.A1_atAI770889--8e-1At3g15280unknown proteinO.I.H.G.S.X.
0.2928.10.99Zm.3076.1.A1_atCF624721mitochondrial import inner membrane translocase subunit Tim10-2e-12At2g29530mitochondrial import inner membrane translocase (TIM10)O.I.H.G.S.X.
0.2216.90.99ZmAffx.758.1.S1_atAI746000--3e-3At4g22260IM (IMMUTANS)O.I.H.G.S.X.
0.147.70.99Zm.6085.2.A1_a_atAI759119hypothetical protein LOC100280198-1e+1At5g53820unknown proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.6179.50.99ZmAffx.795.1.A1_atAI770340--3e-3At5g46350WRKY8O.I.H.G.S.X.
0.5775.10.99ZmAffx.282.2.A1_atAI670245--3e+0At5g09520hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.5674.40.99Zm.5324.1.A1_atAI619250hypothetical protein LOC100280067-3e-11At4g19710bifunctional aspartate kinase/homoserine dehydrogenase, putative / AK-HSDH, putativeO.I.H.G.S.X.
0.5571.60.99ZmAffx.977.1.A1_atAI833949--8e-1At4g04630unknown proteinO.I.H.G.S.X.
0.5065.70.98ZmAffx.755.1.S1_atAI745946--1e-27Atcg00800-O.I.H.G.S.X.
0.5065.70.99Zm.6311.1.S1_atCO517486hypothetical protein LOC100279296-2e-1At5g67490unknown proteinO.I.H.G.S.X.
0.4759.90.99Zm.13261.2.S1_x_atBQ048034--2e+0At4g40011unknown proteinO.I.H.G.S.X.
0.4658.40.99ZmAffx.1085.1.A1_atAW018111zinc finger, C3HC4 type family protein-3e+0At1g67035unknown proteinO.I.H.G.S.X.
0.4455.70.98Zm.18254.2.S1_atAY111047.1Hypothetical protein LOC100193290-2e+0At5g14370-O.I.H.G.S.X.
0.4352.80.99ZmAffx.1065.1.A1_atAI881971--1e+1At5g36659-O.I.H.G.S.X.
0.4352.80.99ZmAffx.717.1.A1_atAI739812--8e-1At3g07565DNA bindingO.I.H.G.S.X.
0.4251.30.99Zm.7735.1.S1_atCF631408--5e-26At1g43890ATRAB18 (ARABIDOPSIS RAB GTPASE HOMOLOG B18)O.I.H.G.S.X.
0.4048.50.99Zm.19151.1.S1_atCO522803hypothetical protein LOC100217264-2e-1At5g61270PIF7 (PHYTOCHROME-INTERACTING FACTOR7)O.I.H.G.S.X.
0.4048.50.99ZmAffx.708.1.A1_atAI667787hypothetical protein LOC100276870-9e-7At1g05205unknown proteinO.I.H.G.S.X.
0.4048.50.99Zm.18279.1.S1_atCO519886hypothetical protein LOC100276929-7e-1At5g06080LBD33 (LOB DOMAIN-CONTAINING PROTEIN 33)O.I.H.G.S.X.
0.4048.50.99Zm.17344.1.S1_atCK370586--4e+0At4g34050caffeoyl-CoA 3-O-methyltransferase, putativeO.I.H.G.S.X.
0.4048.50.99ZmAffx.476.1.A1_atAI677574hypothetical protein LOC100272823-1e+1Atcg00800-O.I.H.G.S.X.
0.3844.20.98Zm.2545.1.A1_atCO520109hypothetical protein LOC100191420-3e+0At5g05710pleckstrin homology (PH) domain-containing proteinO.I.H.G.S.X.
0.3844.20.99ZmAffx.1429.1.S1_at11990232-14--0Atcg00170-O.I.H.G.S.X.
0.3641.30.98Zm.2579.1.A1_atAW017722hypothetical protein LOC100276855-2e-12At5g25265unknown proteinO.I.H.G.S.X.
0.3641.30.99Zm.19051.1.A1_atCO533855phi-1-like phosphate-induced protein-1e+0At1g35140PHI-1 (PHOSPHATE-INDUCED 1)O.I.H.G.S.X.
0.3641.30.99Zm.13947.6.A1_a_atAI711658hypothetical protein LOC100193883-6e-10At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)O.I.H.G.S.X.
0.3641.30.99Zm.19165.1.S1_atCF047794nitric oxide synthase interacting protein-6e-4At1g61620phosphoinositide bindingO.I.H.G.S.X.
0.3641.30.98Zm.13711.1.A1_atAY106552.1--2e-4At1g31780-O.I.H.G.S.X.
0.3336.00.99Zm.2551.1.A1_atBG841855--3e-1At1g62422unknown proteinO.I.H.G.S.X.
0.3336.00.99Zm.13693.1.S1_atAY106770.1--6e-54At4g02480AAA-type ATPase family proteinO.I.H.G.S.X.
0.3336.00.99ZmAffx.762.1.A1_atAI746038--8e-1At1g78895-O.I.H.G.S.X.
0.3336.00.99Zm.18515.1.A1_atCF629792hypothetical protein LOC100191462-1e+0At1g16430surfeit locus protein 5 family protein / SURF5 family proteinO.I.H.G.S.X.
0.3336.00.99Zm.17199.1.A1_atCK370582hypothetical protein LOC100191930-2e-10At3g27960kinesin light chain-relatedO.I.H.G.S.X.
0.3336.00.99Zm.1678.1.S1_atAW600497methylglutaconyl-CoA hydratase-2e+0At5g48690-O.I.H.G.S.X.
0.3336.00.99Zm.12561.1.A1_atAI834417hypothetical protein LOC100217134-8e-1At5g40155-O.I.H.G.S.X.
0.3233.40.99Zm.12460.1.A1_atAY104812.1--2e+1At5g10430AGP4 (ARABINOGALACTAN PROTEIN 4)O.I.H.G.S.X.
0.3131.60.99Zm.16948.1.A1_atAY112459.1vesicle-associated membrane protein 725-3e-67At2g33120SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)O.I.H.G.S.X.
0.3131.61.00ZmAffx.966.1.A1_atAI677247--8e-1At5g47830unknown proteinO.I.H.G.S.X.
0.3029.80.99ZmAffx.1186.1.A1_atAY110093.1--2e+0At5g61200-O.I.H.G.S.X.
0.3029.80.98--O.I.H.G.S.X.
0.2928.10.99Zm.11799.1.A1_atCK985664hypothetical protein LOC100192656-1e+0At5g41908unknown proteinO.I.H.G.S.X.
0.2828.10.99ZmAffx.406.13.S1_atAI670444--5e+0At2g40316unknown proteinO.I.H.G.S.X.
0.2724.60.99ZmAffx.1095.1.A1_atAW076355--1e+1At5g24790unknown proteinO.I.H.G.S.X.
0.2724.60.99Zm.3849.1.S1_atCK370197glutamate decarboxylase-3e-21At3g17760GAD5 (glutamate decarboxylase 5)O.I.H.G.S.X.
0.2724.60.99Zm.4935.1.A1_atAI586495--3e-1At5g49230HRB1 (HYPERSENSITIVE TO RED AND BLUE)O.I.H.G.S.X.
0.2622.70.98Zm.7074.2.A1_atCK368645--1e-2At1g18070EF-1-alpha-related GTP-binding protein, putativeO.I.H.G.S.X.
0.2622.70.99Zm.13927.1.A1_atU41079.1--1e+0At3g47295unknown proteinO.I.H.G.S.X.
0.2622.70.98Zm.3889.6.S1_atAI691964Hypothetical protein LOC100194114-3e+0At2g38230ATPDX1.1 (pyridoxine biosynthesis 1.1)O.I.H.G.S.X.
0.2521.30.98ZmAffx.282.1.A1_atAI670410--3e+0At5g09520hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.2521.30.99ZmAffx.205.1.S1_atAI670190--8e-1At4g17520nuclear RNA-binding protein, putativeO.I.H.G.S.X.
0.2521.30.99Zm.2914.1.S1_atAW091221--4e-1At1g23410ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.8GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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