Co-expression analysis

Gene ID ZmAffx.241.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g75190: unknown protein (HF=3e+0)
Module size 7 genes
NF 0.34
%ile 34.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5976.10.99ZmAffx.241.1.A1_atAI670253--3e+0At1g75190unknown proteinO.I.H.G.S.X.
0.7792.10.99Zm.3288.1.A1_atCK347415immediate-early protein RSP40-2e-2At3g09032unknown proteinO.I.H.G.S.X.
0.4455.70.99Zm.7540.1.S1_atCF055286hypothetical protein LOC100192075-1e-5At4g29130HXK1 (HEXOKINASE 1)O.I.H.G.S.X.
0.4455.70.99ZmAffx.898.1.A1_atAI770889--8e-1At3g15280unknown proteinO.I.H.G.S.X.
0.2928.10.99Zm.3076.1.A1_atCF624721mitochondrial import inner membrane translocase subunit Tim10-2e-12At2g29530mitochondrial import inner membrane translocase (TIM10)O.I.H.G.S.X.
0.2216.90.99ZmAffx.758.1.S1_atAI746000--3e-3At4g22260IM (IMMUTANS)O.I.H.G.S.X.
0.147.70.99Zm.6085.2.A1_a_atAI759119hypothetical protein LOC100280198-1e+1At5g53820unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.8GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1620887_at, orthologous to the query gene, ZmAffx.241.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5980.61620887_atAt1g75190--3e+0At1g50440zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6484.71618608_atAt1g75190--5e+0At5g26210AL4 (ALFIN-LIKE 4)O.I.H.G.S.X.
0.5879.81613001_a_atAt1g75190hypothetical protein LOC100266839-1e-22At1g52370ribosomal protein L22 family proteinO.I.H.G.S.X.
0.5679.41607051_x_atAt1g75190--9e-42At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.
0.5475.71620156_atAt1g75190--2e+0At4g00100ATRPS13A (ARABIDOPSIS THALIANA RIBOSOMAL PROTEIN S13A)O.I.H.G.S.X.
0.5273.91622617_x_atAt1g75190--3e-25At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.5273.91616866_atAt1g75190--2e+0At3g29035ATNAC3 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 3)O.I.H.G.S.X.
0.5072.71615025_atAt1g75190--9e-42At5g3553040S ribosomal protein S3 (RPS3C)O.I.H.G.S.X.
0.4868.81621328_atAt1g75190--9e-1At4g18470SNI1O.I.H.G.S.X.
0.4666.51610244_x_atAt1g75190hypothetical protein LOC100261052-1e-3At4g1500060S ribosomal protein L27 (RPL27C)O.I.H.G.S.X.
0.4464.11613734_atAt1g75190--4e-10At5g40530-O.I.H.G.S.X.
0.4158.71613664_atAt1g75190--7e-1At2g17130IDH2 (ISOCITRATE DEHYDROGENASE SUBUNIT 2)O.I.H.G.S.X.
0.4057.71610198_atAt1g75190--4e-6At5g60800heavy-metal-associated domain-containing proteinO.I.H.G.S.X.
0.3954.91614101_atAt1g75190--4e+0At5g45973unknown proteinO.I.H.G.S.X.
0.3345.71613174_atAt1g75190--4e-4At4g01000ubiquitin family proteinO.I.H.G.S.X.
0.3141.31606703_atAt1g75190--5e+0At3g13882structural constituent of ribosomeO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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