Co-expression analysis

Gene ID ZmAffx.241.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g75190: unknown protein (HF=3e+0)
Module size 7 genes
NF 0.34
%ile 34.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5976.10.99ZmAffx.241.1.A1_atAI670253--3e+0At1g75190unknown proteinO.I.H.G.S.X.
0.7792.10.99Zm.3288.1.A1_atCK347415immediate-early protein RSP40-2e-2At3g09032unknown proteinO.I.H.G.S.X.
0.4455.70.99Zm.7540.1.S1_atCF055286hypothetical protein LOC100192075-1e-5At4g29130HXK1 (HEXOKINASE 1)O.I.H.G.S.X.
0.4455.70.99ZmAffx.898.1.A1_atAI770889--8e-1At3g15280unknown proteinO.I.H.G.S.X.
0.2928.10.99Zm.3076.1.A1_atCF624721mitochondrial import inner membrane translocase subunit Tim10-2e-12At2g29530mitochondrial import inner membrane translocase (TIM10)O.I.H.G.S.X.
0.2216.90.99ZmAffx.758.1.S1_atAI746000--3e-3At4g22260IM (IMMUTANS)O.I.H.G.S.X.
0.147.70.99Zm.6085.2.A1_a_atAI759119hypothetical protein LOC100280198-1e+1At5g53820unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.198.8GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320471protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320472protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, HgAffx.24265.1.S1_at, orthologous to the query gene, ZmAffx.241.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8291.9HgAffx.24265.1.S1_atAt1g75190--3e-1At1g69460emp24/gp25L/p24 family proteinO.I.H.G.S.X.
0.5878.8PsAffx.C52000084_atAt1g75190--2e+0At5g22140pyridine nucleotide-disulphide oxidoreductase family proteinO.I.H.G.S.X.
0.5878.8HgAffx.1235.1.A1_atAt1g75190--4e+0At2g28420lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.H.G.S.X.
0.5172.3PsAffx.C7000016_atAt1g75190--3e+0At4g26920-O.I.H.G.S.X.
0.4766.6GmaAffx.14280.1.S1_atAt1g75190--1e-8At1g22710SUC2 (SUCROSE-PROTON SYMPORTER 2)O.I.H.G.S.X.
0.4766.6HgAffx.9055.1.S1_atAt1g75190--2e+0At5g49015Expressed proteinO.I.H.G.S.X.
0.4766.6PsAffx.CL1693Contig1_atAt1g75190--6e+0At5g20190bindingO.I.H.G.S.X.
0.4259.3HgAffx.14720.1.A1_atAt1g75190--2e-1At1g66360C2 domain-containing proteinO.I.H.G.S.X.
0.4259.3GmaAffx.14602.1.S1_atAt1g75190--2e-1At3g45851unknown proteinO.I.H.G.S.X.
0.4158.1HgAffx.18050.1.S1_atAt1g75190--3e+0At5g42504unknown proteinO.I.H.G.S.X.
0.3954.5HgAffx.17965.1.S1_atAt1g75190--2e+0At2g23340AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.3447.2PsAffx.C3000160_s_atAt1g75190--4e+0At5g42860unknown proteinO.I.H.G.S.X.
0.3243.7PsAffx.CL1850Contig1_atAt1g75190--3e+0At5g15960KIN1O.I.H.G.S.X.
0.3142.2PsAffx.psHB004xH08f_atAt1g75190--5e+0At3g61840unknown proteinO.I.H.G.S.X.
0.3040.4HgAffx.7943.1.S1_atAt1g75190--5e+0At2g13570NF-YB7 (NUCLEAR FACTOR Y, SUBUNIT B7)O.I.H.G.S.X.
0.2025.1GmaAffx.24499.1.S1_atAt1g75190--3e+0At5g66210CPK28O.I.H.G.S.X.
0.1822.3GmaAffx.10787.1.S1_atAt1g75190--1e-2At5g16790-O.I.H.G.S.X.
0.1721.2GmaAffx.12608.1.A1_atAt1g75190--2e-1At3g46380unknown proteinO.I.H.G.S.X.
0.1316.3GmaAffx.25692.1.S1_atAt1g75190--3e-1At4g24110unknown proteinO.I.H.G.S.X.
0.0912.0GmaAffx.53244.1.S1_atAt1g75190--4e+0At4g29930basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.0912.0GmaAffx.62630.1.S1_atAt1g75190--9e-1At5g23035-O.I.H.G.S.X.
0.058.0GmaAffx.89861.1.S1_s_atAt1g75190Ubiquitin-3e-127At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.058.0Gma.2534.1.S1_s_atAt1g75190Ubiquitin-2e-140At4g05320UBQ10 (POLYUBIQUITIN 10)O.I.H.G.S.X.
0.058.0GmaAffx.26289.1.S1_atAt1g75190--4e-3At5g06570hydrolaseO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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