Co-expression analysis

Gene ID	ZmAffx.238.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At3g62140: unknown protein (HF=1e+1)
Module size	6 genes
NF	0.47
%ile	59.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.1	0.96	ZmAffx.238.1.A1_at	AI670250	-	-	1e+1	At3g62140	unknown protein	O.I.	H.G.	S.X.	Please select
0.77	92.1	0.96	Zm.4808.1.A1_at	CK827550	-	-	4e-8	At1g16210	unknown protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.95	Zm.18990.1.A1_at	CO520764	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1	-	1e+0	At3g01319	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.96	Zm.2557.2.S1_x_at	AY106871.1	DNA binding protein	-	9e-6	At4g39100	SHL1 (short life)	O.I.	H.G.	S.X.	Please select
0.39	45.6	0.96	Zm.18103.1.A1_at	AY187878.1	nitrate transporter	-	8e-4	At1g32450	NRT1.5 (NITRATE TRANSPORTER 1.5)	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.96	Zm.19111.1.A1_at	CO531150	-	-	4e-4	At3g17940	aldose 1-epimerase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	97.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.7	97.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.2	97.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320472	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320466	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.6	96.4	GSM320468	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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