Co-expression analysis

Gene ID ZmAffx.208.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g15460: MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2) (HF=6e-1)
Module size 7 genes
NF 0.26
%ile 21.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8094.00.99ZmAffx.208.1.S1_atAI670216--6e-1At5g15460MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)O.I.H.G.S.X.
0.5571.60.99ZmAffx.852.1.A1_atAI770652--1e-11At3g12690AGC1.5 (AGC KINASE 1.5)O.I.H.G.S.X.
0.4048.50.99--O.I.H.G.S.X.
0.4048.50.99ZmAffx.480.1.A1_atAI677621transmembrane 9 superfamily protein member 4-8e-1At1g18871unknown proteinO.I.H.G.S.X.
0.2828.10.99Zm.13740.1.A1_atAW330707--2e-16At2g29140APUM3 (Arabidopsis Pumilio 3)O.I.H.G.S.X.
0.1912.80.99ZmAffx.406.9.A1_atAI670512--1e+1At5g16580BGLU2 (BETA GLUCOSIDASE 2)O.I.H.G.S.X.
0.104.60.99Zm.12402.1.S1_atAY109060.1hypothetical protein LOC100193926-3e-7At4g33000CBL10 (CALCINEURIN B-LIKE 10)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.498.7GSM320468protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320465protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.798.3GSM320467protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.204565.1.S1_at, orthologous to the query gene, ZmAffx.208.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5078.6PtpAffx.204565.1.S1_atAt5g15460SAUR family protein-5e-1At3g03850auxin-responsive protein, putativeO.I.H.G.S.X.
0.4673.7PtpAffx.224029.1.S1_x_atAt5g15460hypothetical protein-1e+0At5g4152040S ribosomal protein S10 (RPS10B)O.I.H.G.S.X.
0.4268.6PtpAffx.209763.1.S1_atAt5g15460hypothetical protein-3e+0At5g48945LCR46 (Low-molecular-weight cysteine-rich 46)O.I.H.G.S.X.
0.4067.0PtpAffx.219441.1.S1_x_atAt5g15460cc-nbs-lrr resistance protein-1e-1At5g45210disease resistance protein (TIR-NBS-LRR class), putativeO.I.H.G.S.X.
0.3863.7PtpAffx.95500.1.A1_atAt5g15460--1e+0At5g38140NF-YC12 (NUCLEAR FACTOR Y, SUBUNIT C12)O.I.H.G.S.X.
0.2340.5PtpAffx.124431.1.A1_atAt5g15460--2e+0At5g35510unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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