Co-expression analysis

Gene ID	ZmAffx.180.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At1g17235: RTFL11 (ROTUNDIFOLIA LIKE 11) (HF=8e-1)
Module size	6 genes
NF	0.77
%ile	96.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	1.00	ZmAffx.180.1.A1_at	AI668329	-	-	8e-1	At1g17235	RTFL11 (ROTUNDIFOLIA LIKE 11)	O.I.	H.G.	S.X.	Please select
0.83	95.6	1.00	Zm.1059.2.A1_a_at	CO518029	ATOZI1	-	2e-7	At4g00860	ATOZI1	O.I.	H.G.	S.X.	Please select
0.67	85.8	1.00	ZmAffx.1431.1.S1_at	11990232-16	-	-	0	Atcg00150	-	O.I.	H.G.	S.X.	Please select
0.67	85.8	1.00	ZmAffx.1375.1.S1_at	40794996-50	-	-	2e+0	At5g48510	speckle-type POZ protein-related	O.I.	H.G.	S.X.	Please select
0.63	81.1	1.00	ZmAffx.1337.1.S1_at	11990232-85	-	-	6e-94	Atcg01050	-	O.I.	H.G.	S.X.	Please select
0.61	79.5	1.00	ZmAffx.158.1.S1_at	AI668130	-	-	3e-1	At2g23400	dehydrodolichyl diphosphate synthase, putative / DEDOL-PP synthase, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.5	98.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.2	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.9	97.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.5	96.3	GSM320469	protocol: Amplified fragment restriction polymorphism (AFLP) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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