Co-expression analysis

Gene ID ZmAffx.174.1.A1_at
Gene name SAUR12 - auxin-responsive SAUR family member
Homology with ArabidopsisSimilar to At5g59060: unknown protein (HF=3e+0)
Module size 11 genes
NF 0.49
%ile 63.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99ZmAffx.174.1.A1_atAI668269SAUR12 - auxin-responsive SAUR family member-3e+0At5g59060unknown proteinO.I.H.G.S.X.
0.6381.10.99ZmAffx.1455.1.S1_at11990232-22--0Atcg00350-O.I.H.G.S.X.
0.5369.11.00ZmAffx.1424.1.S1_at40794996-99--9e+0At2g40240pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.5065.71.00ZmAffx.1352.1.S1_at40794996-156--0Atmg00160-O.I.H.G.S.X.
0.4861.30.99Zm.9469.1.A1_atBM269128--2e+1At3g21610-O.I.H.G.S.X.
0.4759.91.00ZmAffx.1408.1.S1_at40794996-83--3e+0At5g3985040S ribosomal protein S9 (RPS9C)O.I.H.G.S.X.
0.4658.41.00ZmAffx.175.1.A1_atAI668276--3e+0At3g06820mov34 family proteinO.I.H.G.S.X.
0.4251.30.99ZmAffx.1453.1.S1_at11990232-20--3e-46Atcg00330-O.I.H.G.S.X.
0.4048.51.00ZmAffx.1415.1.S1_at40794996-90--4e-2At2g25312-O.I.H.G.S.X.
0.3233.41.00ZmAffx.1414.1.S1_at40794996-89--0Atmg00520-O.I.H.G.S.X.
0.2928.10.99ZmAffx.1533.1.S1_at40794996-14--3e+0At3g53610ATRAB8O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
14.498.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.498.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.698.8GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.998.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.898.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.198.4GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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