Co-expression analysis

Gene ID	ZmAffx.170.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At1g13245: RTFL17 (ROTUNDIFOLIA LIKE 17) (HF=8e-1)
Module size	6 genes
NF	0.65
%ile	87.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.95	ZmAffx.170.1.S1_at	AI668224	-	-	8e-1	At1g13245	RTFL17 (ROTUNDIFOLIA LIKE 17)	O.I.	H.G.	S.X.	Please select
0.91	99.0	0.94	ZmAffx.168.1.S1_at	AI668216	-	-	2e-1	At3g24250	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.94	ZmAffx.17.1.A1_at	AI491699	-	-	1e+1	At2g16535	-	O.I.	H.G.	S.X.	Please select
0.63	81.1	0.94	ZmAffx.169.1.S1_at	AI664986	-	-	2e-1	At2g24765	ARF3 (ADP-RIBOSYLATION FACTOR 3)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.96	ZmAffx.166.1.S1_at	AI668207	-	-	1e+1	At5g57370	unknown protein	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.93	ZmAffx.171.1.S1_at	AI668231	Hypothetical protein LOC100192595	-	3e+0	At1g51160	synbindin, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.0	96.7	GSM253270	ZM_4.5d_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
4.4	96.2	GSM320441	protocol: mRNA - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM253269	ZM_4.5d_Mock_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
4.1	95.9	GSM320439	protocol: mRNA - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM253262	ZM_4d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.5	95.1	GSM253268	ZM_4.5d_Mock_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
3.5	95.1	GSM320438	protocol: mRNA - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320443	protocol: mRNA - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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