Co-expression analysis

Gene ID ZmAffx.169.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At2g24765: ARF3 (ADP-RIBOSYLATION FACTOR 3) (HF=2e-1)
Module size 14 genes
NF 0.84
%ile 98.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7389.90.93ZmAffx.169.1.S1_atAI664986--2e-1At2g24765ARF3 (ADP-RIBOSYLATION FACTOR 3)O.I.H.G.S.X.
0.8996.80.96ZmAffx.1143.1.S1_atAW399931--8e+0At5g01340mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.8696.30.94ZmAffx.171.1.S1_atAI668231Hypothetical protein LOC100192595-3e+0At1g51160synbindin, putativeO.I.H.G.S.X.
0.8696.30.95ZmAffx.766.1.S1_atAI746089Hypothetical protein LOC100191384-3e+0At3g12320unknown proteinO.I.H.G.S.X.
0.8595.90.96ZmAffx.1486.1.S1_at11990232-43--3e-56Atcg00650-O.I.H.G.S.X.
0.8595.90.96ZmAffx.1480.1.S1_at40794996-107--1e+1At5g1520040S ribosomal protein S9 (RPS9B)O.I.H.G.S.X.
0.8595.90.96ZmAffx.1501.1.S1_at40794996-118--8e-1At5g12300C2 domain-containing proteinO.I.H.G.S.X.
0.8395.60.94ZmAffx.1319.1.S1_at40794996-32--4e-2At4g11880AGL14 (agamous-like 14)O.I.H.G.S.X.
0.8194.30.94ZmAffx.1356.1.S1_at40794996-158--3e+0At5g5795026S proteasome regulatory subunit, putativeO.I.H.G.S.X.
0.8194.30.93ZmAffx.1475.1.S1_at40794996-102--6e-1At2g45010unknown proteinO.I.H.G.S.X.
0.8194.30.95ZmAffx.1357.1.S1_at40794996-46--2e-1At1g26921unknown proteinO.I.H.G.S.X.
0.7792.10.95ZmAffx.1538.1.S1_at40794996-128--3e+0At3g21730dihydroneopterin aldolase family proteinO.I.H.G.S.X.
0.7792.10.95ZmAffx.1511.1.S1_at11990232-52--4e-48Atcg00740-O.I.H.G.S.X.
0.7087.00.95ZmAffx.1471.1.S1_at11990232-38--9e-89Atcg00580-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.898.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.697.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM205370B73 13 DAP endosperm tissue biological replicate 2GSE8275Non-additive and imprinted gene expression in hybrid maize endosperm_13DAPLink to GEO
2.592.6GSM320442protocol: mRNA - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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