Co-expression analysis

Gene ID	ZmAffx.1448.1.S1_at
Gene name
Homology with Arabidopsis	Similar to At4g37730: AtbZIP7 (Arabidopsis thaliana basic leucine-zipper 7) (HF=7e-1)
Module size	6 genes
NF	0.57
%ile	76.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	1.00	ZmAffx.1448.1.S1_at	40794996-5	-	-	7e-1	At4g37730	AtbZIP7 (Arabidopsis thaliana basic leucine-zipper 7)	O.I.	H.G.	S.X.	Please select
0.67	85.8	1.00	ZmAffx.1449.1.S1_at	40794996-6	-	-	1e+0	At3g32090	transcription factor-related	O.I.	H.G.	S.X.	Please select
0.55	71.6	1.00	ZmAffx.1414.1.S1_at	40794996-89	-	-	0	Atmg00520	-	O.I.	H.G.	S.X.	Please select
0.53	69.1	1.00	ZmAffx.1352.1.S1_at	40794996-156	-	-	0	Atmg00160	-	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	ZmAffx.1386.1.S1_at	40794996-61	-	-	7e-1	At3g21920	pollen coat receptor kinase, putative	O.I.	H.G.	S.X.	Please select
0.29	28.1	1.00	ZmAffx.1416.1.S1_at	40794996-91	-	-	3e-1	At3g21860	ASK10 (ARABIDOPSIS SKP1-LIKE 10)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
20.2	99.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.6	99.3	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
19.0	99.2	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.6	99.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.2	99.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.3	99.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.1	99.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.5	99.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.7	99.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.0	98.4	GSM320459	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.223979.1.S1_at, orthologous to the query gene, ZmAffx.1448.1.S1_at

VF	%ile	Gene ID	Repr. ID	Gene Name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.2	PtpAffx.223979.1.S1_at	At4g37730	hypothetical protein	-	3e+0	At5g56420	F-box family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.77	94.9	PtpAffx.34439.1.S1_at	At4g37730	hypothetical protein	-	1e+0	At5g39010	unknown protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.73	93.6	Ptp.7022.1.S1_at	At4g37730	hypothetical protein	-	5e-79	At5g03860	MLS (MALATE SYNTHASE)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.63	88.1	PtpAffx.211853.1.S1_at	At4g37730	hypothetical protein	-	3e+0	Atcg00160	-	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.44	71.9	PtpAffx.222332.1.S1_s_at	At4g37730	hypothetical protein	-	2e-17	At5g44260	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)
0.40	67.0	PtpAffx.9877.1.S1_at	At4g37730	hypothetical protein	-	3e-2	At1g08450	CRT3 (CALRETICULIN 3)	O.I.	H.G.	S.X.	Please selecteFP Browser (expression)

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Triticum_aestivum

Vitis_vinifera

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