Co-expression analysis

Gene ID ZmAffx.1400.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g05631: unknown protein (HF=3e+0)
Module size 6 genes
NF 0.64
%ile 85.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.01.00ZmAffx.1400.1.S1_at40794996-75--3e+0At4g05631unknown proteinO.I.H.G.S.X.
0.6785.81.00ZmAffx.138.1.A1_atAI667759--3e+0At1g66510AAR2 protein familyO.I.H.G.S.X.
0.6785.81.00ZmAffx.1372.1.S1_at40794996-160--7e-1At2g34355nodulin-relatedO.I.H.G.S.X.
0.5674.40.99ZmAffx.1351.1.S1_at40794996-43--2e+0At3g21520unknown proteinO.I.H.G.S.X.
0.4759.91.00ZmAffx.1370.1.S1_at11990232-98--5e+0At5g42955unknown proteinO.I.H.G.S.X.
0.4352.81.00ZmAffx.1376.1.S1_s_at40794996-51--0Atmg00080-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.199.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.199.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
20.099.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.799.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.999.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.499.2GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
18.099.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.899.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.199.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.298.0GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1621408_at, orthologous to the query gene, ZmAffx.1400.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8394.61621408_atAt4g05631hypothetical protein LOC100244724-5e+0Atmg01370-O.I.H.G.S.X.
0.6888.01621887_atAt4g05631hypothetical protein LOC100262699-3e-1At4g36850-O.I.H.G.S.X.
0.6484.71619816_atAt4g05631hypothetical protein LOC100250681-2e-11At1g75350emb2184 (embryo defective 2184)O.I.H.G.S.X.
0.6384.31619621_atAt4g05631hypothetical protein LOC100261348-1e-18At5g03880electron carrierO.I.H.G.S.X.
0.6183.21618616_atAt4g05631hypothetical protein LOC100259626-5e-10At4g13670PTAC5 (PLASTID TRANSCRIPTIONALLY ACTIVE5)O.I.H.G.S.X.
0.6081.91620726_atAt4g05631hypothetical protein LOC100261348-2e-15At5g03880electron carrierO.I.H.G.S.X.
0.5980.61618750_atAt4g05631hypothetical protein LOC100241679-2e-50At2g34860EDA3 (embryo sac development arrest 3)O.I.H.G.S.X.
0.5779.81613595_atAt4g05631hypothetical protein LOC100248004-5e-139At2g45290transketolase, putativeO.I.H.G.S.X.
0.5679.41617522_a_atAt4g05631hypothetical protein LOC100242924-5e-6At1g50320ATHXO.I.H.G.S.X.
0.5679.41618597_atAt4g05631hypothetical protein LOC100244373-3e-1At4g39070zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.5577.31616063_atAt4g05631hypothetical protein LOC100249892-3e-17At4g17300NS1O.I.H.G.S.X.
0.5375.21616667_a_atAt4g05631similar to ribosomal protein L29 family protein /// hypothetical protein LOC100259766-7e-5At5g65220ribosomal protein L29 family proteinO.I.H.G.S.X.
0.5273.91615310_s_atAt4g05631hypothetical protein LOC100266836-7e-21At5g57170macrophage migration inhibitory factor family protein / MIF family proteinO.I.H.G.S.X.
0.5072.71612880_s_atAt4g05631hypothetical protein LOC100262788-4e-20At5g45680FK506-binding protein 1 (FKBP13)O.I.H.G.S.X.
0.4969.31612544_atAt4g05631hypothetical protein LOC100260093-5e-13At5g40950RPL27 (RIBOSOMAL PROTEIN LARGE SUBUNIT 27)O.I.H.G.S.X.
0.4868.81620744_atAt4g05631hypothetical protein LOC100248911-2e-6At1g20340DRT112O.I.H.G.S.X.
0.4868.81611733_s_atAt4g05631hypothetical protein LOC100240928-2e-12At1g03130PSAD-2 (photosystem I subunit D-2)O.I.H.G.S.X.
0.4767.71613405_atAt4g05631hypothetical protein LOC100250386-5e-28At3g62030peptidyl-prolyl cis-trans isomerase, chloroplast / cyclophilin / rotamase / cyclosporin A-binding protein (ROC4)O.I.H.G.S.X.
0.4666.51615340_atAt4g05631similar to A_IG002N01.31 gene product-1e-30At4g01050hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.4464.11620768_atAt4g05631hypothetical protein LOC100259668-1e-19At1g04420aldo/keto reductase family proteinO.I.H.G.S.X.
0.4260.11622193_atAt4g05631hypothetical protein LOC100265325-2e-35At5g30510RPS1 (RIBOSOMAL PROTEIN S1)O.I.H.G.S.X.
0.4260.11618370_atAt4g05631hypothetical protein LOC100242802-8e-31At4g12800PSAL (photosystem I subunit L)O.I.H.G.S.X.
0.4260.11620919_atAt4g05631hypothetical protein LOC100258879-3e-30At4g03280PETC (PHOTOSYNTHETIC ELECTRON TRANSFER C)O.I.H.G.S.X.
0.4158.71616415_atAt4g05631hypothetical protein LOC100254604-3e-4At5g49030OVA2 (ovule abortion 2)O.I.H.G.S.X.
0.4158.71622642_atAt4g05631hypothetical protein LOC100244293-2e+0At5g511104-alpha-hydroxytetrahydrobiopterin dehydrataseO.I.H.G.S.X.
0.4057.71612906_atAt4g05631hypothetical protein LOC100257384-3e-21At5g13410immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.3853.61617204_atAt4g05631hypothetical protein LOC100264070-2e-21At2g33800ribosomal protein S5 family proteinO.I.H.G.S.X.
0.3751.71616222_atAt4g05631--1e-18At3g47650bundle-sheath defective protein 2 family / bsd2 familyO.I.H.G.S.X.
0.3650.71614598_atAt4g05631hypothetical protein LOC100266604-2e-4At3g08940LHCB4.2 (light harvesting complex PSII)O.I.H.G.S.X.
0.3345.71611324_atAt4g05631hypothetical protein LOC100263597-4e-7At1g14345oxidoreductaseO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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