Co-expression analysis

Gene ID ZmAffx.1370.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At5g42955: unknown protein (HF=5e+0)
Module size 6 genes
NF 0.69
%ile 91.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.01.00ZmAffx.1370.1.S1_at11990232-98--5e+0At5g42955unknown proteinO.I.H.G.S.X.
0.7389.91.00ZmAffx.1372.1.S1_at40794996-160--7e-1At2g34355nodulin-relatedO.I.H.G.S.X.
0.6381.11.00ZmAffx.1374.1.S1_at40794996-162--0Atmg00270-O.I.H.G.S.X.
0.6077.81.00ZmAffx.178.1.A1_atAI668305trypsin/factor XIIA inhibitor-3e+0At2g24040hydrophobic protein, putative / low temperature and salt responsive protein, putativeO.I.H.G.S.X.
0.5674.41.00ZmAffx.159.1.A1_atAI668136--1e+1At5g48680sterile alpha motif (SAM) domain-containing proteinO.I.H.G.S.X.
0.5369.11.00ZmAffx.1376.1.S1_s_at40794996-51--0Atmg00080-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.899.0GSM320456protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
15.499.0GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.998.9GSM320462protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.698.9GSM320459protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320464protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.798.7GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320463protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.798.5GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.298.4GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os11g0507100, orthologous to the query gene, ZmAffx.1370.1.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8496.0Os11g0507100At5g42955--3e+0At2g11910unknown proteinO.I.H.G.S.X.
0.7893.4Os04g0368900At5g42955--1e-2At2g28510Dof-type zinc finger domain-containing proteinO.I.H.G.S.X.
0.7692.2Os11g0506400At5g42955--4e-1At5g21274CAM6 (CALMODULIN 6)O.I.H.G.S.X.
0.7692.2Os02g0501150At5g42955--6e-2At5g55750hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.7591.9Os03g0263100At5g42955--1e+1At5g26790unknown proteinO.I.H.G.S.X.
0.7088.4Os12g0248200At5g42955--1e+0At4g27310zinc finger (B-box type) family proteinO.I.H.G.S.X.
0.6887.5Os01g0936350At5g42955--6e-1At5g01015unknown proteinO.I.H.G.S.X.
0.6887.5Os09g0348900At5g42955--1e-2At1g22300GRF10 (GENERAL REGULATORY FACTOR 10)O.I.H.G.S.X.
0.6787.2Os06g0470500At5g42955--4e-1At1g25420unknown proteinO.I.H.G.S.X.
0.6483.4Os07g0185401At5g42955--5e-1At4g24930thylakoid lumenal 17.9 kDa protein, chloroplastO.I.H.G.S.X.
0.6382.7Os08g0437300At5g42955-Conserved hypothetical protein5e-7At4g38620MYB4O.I.H.G.S.X.
0.6281.5Os07g0453901At5g42955--2e+0At4g16008unknown proteinO.I.H.G.S.X.
0.6181.2Os04g0291600At5g42955--3e+0At3g44950glycine-rich proteinO.I.H.G.S.X.
0.5978.0Os10g0470400At5g42955--6e+0At5g36280-O.I.H.G.S.X.
0.5676.3Os07g0664400At5g42955-Alcohol dehydrogenase-like protein7e+0At2g25697unknown proteinO.I.H.G.S.X.
0.5676.3Os04g0579600At5g42955--7e-2At1g47210cyclin family proteinO.I.H.G.S.X.
0.5676.3Os09g0556100At5g42955--1e+1At5g55570unknown proteinO.I.H.G.S.X.
0.5573.7Os01g0517300At5g42955--9e+0At5g65310ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5)O.I.H.G.S.X.
0.5269.6Os04g0374000At5g42955-NBS-LRR protein (Fragment)2e+0At1g79810TED3 (REVERSAL OF THE DET PHENOTYPE 3)O.I.H.G.S.X.
0.5168.7Os07g0286200At5g42955--8e-1At3g63095-O.I.H.G.S.X.
0.4458.1Os05g0461200At5g42955--1e-1At5g35620LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1)O.I.H.G.S.X.
0.4355.4Os12g0215200At5g42955--2e+0At4g18980unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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